Basic Information | |||
Gene ID | 778718 | ||
Gene Name | Ci-Orphan HMG-2; LOC778718 | ||
Full Name | Transcription factor protein | ||
Organism | Ciona intestinalis [7719] |
Cross Reference | |||
UniProt | Q4H312 | UniGene | Cin.20669 |
PDB | NULL | OMIM | NULL |
KEGG | cin:778718 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 7719.ENSCINP00000027290 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_001071792 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 125 | 199 | 6.70e-21 | High mobility group box domain |
NP_001071792 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 54 | 118 | 9.20e-14 | High mobility group box domain |
NP_001071792 | Pfam | PF00505 | IPR009071 | 130 | 196 | 1.90e-14 | High mobility group box domain |
NP_001071792 | Pfam | PF09011 | IPR009071 | 54 | 118 | 1.80e-13 | High mobility group box domain |
NP_001071792 | ProSiteProfiles | PS50118 | IPR009071 | 130 | 196 | 0.00e-00 | High mobility group box domain |
NP_001071792 | ProSiteProfiles | PS50118 | IPR009071 | 53 | 122 | 0.00e-00 | High mobility group box domain |
NP_001071792 | SMART | SM00398 | IPR009071 | 129 | 197 | 1.20e-20 | High mobility group box domain |
NP_001071792 | SMART | SM00398 | IPR009071 | 52 | 123 | 1.90e-12 | High mobility group box domain |
NP_001071792 | SUPERFAMILY | SSF47095 | IPR009071 | 118 | 201 | 0.00e-00 | High mobility group box domain |
NP_001071792 | SUPERFAMILY | SSF47095 | IPR009071 | 40 | 117 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_001071792 | PF09011 | 6.7e-28 | HMG_box_2 | HMG-box domain |
NP_001071792 | PF00505 | 2.8e-27 | HMG_box | HMG (high mobility group) box |
NP_001071792 | PF06382 | 0.00025 | DUF1074 | Protein of unknown function (DUF1074) |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_001071792 | GO:0005634 | cellular_component | nucleus |
NP_001071792 | GO:0005694 | cellular_component | chromosome |
NP_001071792 | GO:0003677 | molecular_function | DNA binding |