Basic Information
Gene ID 797246
Gene Name sox18; si:ch211-235f6.2
Full Name Uncharacterized protein
Organism Danio rerio [7955]

Cross Reference
UniProt E7F9I2 UniGene Dr.88332
PDB NULL OMIM NULL
KEGG dre:797246 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_001337702 Gene3D G3DSA:1.10.30.10 IPR009071 93 169 4.40e-31 High mobility group box domain
XP_001337702 Pfam PF00505 IPR009071 94 162 1.40e-21 High mobility group box domain
XP_001337702 Pfam PF12067 IPR021934 206 429 5.10e-46 Sox C-terminal transactivation domain
XP_001337702 ProSiteProfiles PS50118 IPR009071 94 162 0.00e-00 High mobility group box domain
XP_001337702 ProSiteProfiles PS51516 IPR021934 314 430 0.00e-00 Sox C-terminal transactivation domain
XP_001337702 SMART SM00398 IPR009071 93 163 9.20e-27 High mobility group box domain
XP_001337702 SUPERFAMILY SSF47095 IPR009071 93 172 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_001337702 PF12067 0 Sox_C_TAD Sox C-terminal transactivation domain
XP_001337702 PF00505 6.8e-22 HMG_box HMG (high mobility group) box
XP_001337702 PF09011 3.8e-08 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
XP_001337702 GO:0006351 biological_process transcription, DNA-templated
XP_001337702 GO:0006355 biological_process regulation of transcription, DNA-templated
XP_001337702 GO:0007275 biological_process multicellular organismal development
XP_001337702 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
XP_001337702 GO:0005634 cellular_component nucleus
XP_001337702 GO:0003677 molecular_function DNA binding
XP_001337702 GO:0043565 molecular_function sequence-specific DNA binding