Basic Information | |||
Gene ID | 81518 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Mef2d | ||
Full Name | Myocyte-specific enhancer factor 2D | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | O89038 | UniGene | Rn.89018 |
PDB | NULL | OMIM | NULL |
KEGG | rno:81518 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 10116.ENSRNOP00000058851 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_110487 | Pfam | PF00319 | IPR002100 | 10 | 59 | 4.30e-22 | Transcription factor, MADS-box |
NP_110487 | Pfam | PF12347 | IPR022102 | 95 | 154 | 1.10e-10 | Holliday junction regulator protein family C-terminal |
NP_110487 | PRINTS | PR00404 | IPR002100 | 23 | 38 | 1.20e-25 | Transcription factor, MADS-box |
NP_110487 | PRINTS | PR00404 | IPR002100 | 3 | 23 | 1.20e-25 | Transcription factor, MADS-box |
NP_110487 | PRINTS | PR00404 | IPR002100 | 38 | 59 | 1.20e-25 | Transcription factor, MADS-box |
NP_110487 | ProSitePatterns | PS00350 | IPR002100 | 3 | 57 | - | Transcription factor, MADS-box |
NP_110487 | ProSiteProfiles | PS50066 | IPR002100 | 1 | 61 | 0.00e-00 | Transcription factor, MADS-box |
NP_110487 | SMART | SM00432 | IPR002100 | 1 | 60 | 3.80e-40 | Transcription factor, MADS-box |
NP_110487 | SUPERFAMILY | SSF55455 | IPR002100 | 2 | 89 | 0.00e-00 | Transcription factor, MADS-box |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_110487 | PF00319 | 2.6e-22 | SRF-TF | SRF-type transcription factor (DNA-binding and dimerisation domain) |
NP_110487 | PF12347 | 1.1e-10 | HJURP_C | Holliday junction regulator protein family C-terminal repeat |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_110487 | GO:0006915 | biological_process | apoptotic process |
NP_110487 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
NP_110487 | GO:0005634 | cellular_component | nucleus |
NP_110487 | GO:0000977 | molecular_function | RNA polymerase II regulatory region sequence-specific DNA binding |
NP_110487 | GO:0000981 | molecular_function | sequence-specific DNA binding RNA polymerase II transcription factor activity |
NP_110487 | GO:0033613 | molecular_function | activating transcription factor binding |
NP_110487 | GO:0042826 | molecular_function | histone deacetylase binding |
NP_110487 | GO:0046983 | molecular_function | protein dimerization activity |