Basic Information | |||
Gene ID | 83726 ; ![]() ![]() | ||
Gene Name | Ctcf | ||
Full Name | Transcriptional repressor CTCF | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | Q9R1D1 | UniGene | Rn.18612 |
PDB | NULL | OMIM | NULL |
KEGG | rno:83726 | UCSC | RGD:621344 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 10116.ENSRNOP00000023851 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_114012 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 264 | 295 | 5.40e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
NP_114012 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 296 | 323 | 2.00e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
NP_114012 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 324 | 352 | 5.20e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
NP_114012 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 353 | 379 | 1.90e-12 | Zinc finger C2H2-type/integrase DNA-binding domain |
NP_114012 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 380 | 398 | 3.90e-11 | Zinc finger C2H2-type/integrase DNA-binding domain |
NP_114012 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 399 | 432 | 9.00e-12 | Zinc finger C2H2-type/integrase DNA-binding domain |
NP_114012 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 468 | 496 | 5.30e-08 | Zinc finger C2H2-type/integrase DNA-binding domain |
NP_114012 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 497 | 515 | 5.40e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
NP_114012 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 516 | 543 | 2.40e-09 | Zinc finger C2H2-type/integrase DNA-binding domain |
NP_114012 | Pfam | PF00096 | IPR007087 | 437 | 460 | 2.90e-02 | Zinc finger, C2H2 |
NP_114012 | ProSitePatterns | PS00028 | IPR007087 | 268 | 288 | - | Zinc finger, C2H2 |
NP_114012 | ProSitePatterns | PS00028 | IPR007087 | 296 | 316 | - | Zinc finger, C2H2 |
NP_114012 | ProSitePatterns | PS00028 | IPR007087 | 324 | 345 | - | Zinc finger, C2H2 |
NP_114012 | ProSitePatterns | PS00028 | IPR007087 | 409 | 430 | - | Zinc finger, C2H2 |
NP_114012 | ProSitePatterns | PS00028 | IPR007087 | 439 | 460 | - | Zinc finger, C2H2 |
NP_114012 | ProSitePatterns | PS00028 | IPR007087 | 469 | 489 | - | Zinc finger, C2H2 |
NP_114012 | ProSitePatterns | PS00028 | IPR007087 | 497 | 517 | - | Zinc finger, C2H2 |
NP_114012 | ProSitePatterns | PS00028 | IPR007087 | 525 | 546 | - | Zinc finger, C2H2 |
NP_114012 | ProSiteProfiles | PS50157 | IPR007087 | 266 | 293 | 0.00e-00 | Zinc finger, C2H2 |
NP_114012 | ProSiteProfiles | PS50157 | IPR007087 | 294 | 321 | 0.00e-00 | Zinc finger, C2H2 |
NP_114012 | ProSiteProfiles | PS50157 | IPR007087 | 322 | 350 | 0.00e-00 | Zinc finger, C2H2 |
NP_114012 | ProSiteProfiles | PS50157 | IPR007087 | 351 | 378 | 0.00e-00 | Zinc finger, C2H2 |
NP_114012 | ProSiteProfiles | PS50157 | IPR007087 | 379 | 406 | 0.00e-00 | Zinc finger, C2H2 |
NP_114012 | ProSiteProfiles | PS50157 | IPR007087 | 407 | 435 | 0.00e-00 | Zinc finger, C2H2 |
NP_114012 | ProSiteProfiles | PS50157 | IPR007087 | 437 | 465 | 0.00e-00 | Zinc finger, C2H2 |
NP_114012 | ProSiteProfiles | PS50157 | IPR007087 | 467 | 494 | 0.00e-00 | Zinc finger, C2H2 |
NP_114012 | ProSiteProfiles | PS50157 | IPR007087 | 495 | 522 | 0.00e-00 | Zinc finger, C2H2 |
NP_114012 | ProSiteProfiles | PS50157 | IPR007087 | 523 | 546 | 0.00e-00 | Zinc finger, C2H2 |
NP_114012 | ProSiteProfiles | PS50157 | IPR007087 | 555 | 573 | 0.00e-00 | Zinc finger, C2H2 |
NP_114012 | SMART | SM00355 | IPR015880 | 266 | 288 | 4.10e-07 | Zinc finger, C2H2-like |
NP_114012 | SMART | SM00355 | IPR015880 | 294 | 316 | 2.40e-05 | Zinc finger, C2H2-like |
NP_114012 | SMART | SM00355 | IPR015880 | 322 | 345 | 2.30e-06 | Zinc finger, C2H2-like |
NP_114012 | SMART | SM00355 | IPR015880 | 351 | 373 | 1.70e-05 | Zinc finger, C2H2-like |
NP_114012 | SMART | SM00355 | IPR015880 | 379 | 401 | 6.80e-06 | Zinc finger, C2H2-like |
NP_114012 | SMART | SM00355 | IPR015880 | 407 | 430 | 6.70e-04 | Zinc finger, C2H2-like |
NP_114012 | SMART | SM00355 | IPR015880 | 437 | 460 | 3.20e-04 | Zinc finger, C2H2-like |
NP_114012 | SMART | SM00355 | IPR015880 | 467 | 489 | 2.60e-04 | Zinc finger, C2H2-like |
NP_114012 | SMART | SM00355 | IPR015880 | 495 | 517 | 1.20e-04 | Zinc finger, C2H2-like |
NP_114012 | SMART | SM00355 | IPR015880 | 523 | 546 | 8.20e-05 | Zinc finger, C2H2-like |
NP_114012 | SMART | SM00355 | IPR015880 | 555 | 575 | 4.10e-02 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_114012 | PF13465 | 0 | zf-H2C2_2 | Zinc-finger double domain |
NP_114012 | PF00096 | 3.7e-31 | zf-C2H2 | Zinc finger, C2H2 type |
NP_114012 | PF13894 | 2.1e-24 | zf-C2H2_4 | C2H2-type zinc finger |
NP_114012 | PF12171 | 2.1e-08 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
NP_114012 | PF13909 | 2.3e-05 | zf-H2C2_5 | C2H2-type zinc-finger domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_114012 | GO:0006351 | biological_process | transcription, DNA-templated |
NP_114012 | GO:0005634 | cellular_component | nucleus |