Basic Information
Gene ID ENSDARG00000005883
Gene Name rfx1a
Full Name Uncharacterized protein
Organism Danio rerio [7955]

Cross Reference
UniProt E7EZ03 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSDARP00000104544 Gene3D G3DSA:1.10.10.10 IPR011991 365 438 2.60e-40 Winged helix-turn-helix DNA-binding domain
ENSDARP00000104544 Pfam PF02257 IPR003150 364 440 4.30e-36 DNA-binding RFX-type winged-helix domain
ENSDARP00000104544 Pfam PF04589 IPR007668 120 284 5.30e-50 RFX1 transcription activation region
ENSDARP00000104544 ProSiteProfiles PS51526 IPR003150 364 439 0.00e-00 DNA-binding RFX-type winged-helix domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSDARP00000104544 PF04589 0 RFX1_trans_act RFX1 transcription activation region
ENSDARP00000104544 PF02257 1.2e-36 RFX_DNA_binding RFX DNA-binding domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSDARP00000104544 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSDARP00000104544 GO:0005634 cellular_component nucleus
ENSDARP00000104544 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
39432 Saimiri boliviensis 101037994 7425 Nasonia vitripennis 100121130
7029 Acyrthosiphon pisum 100159044 10224 Saccoglossus kowalevskii 100372282
9823 Sus scrofa 100511439 30195 Bombus terrestris 100642228
132113 Bombus impatiens 100749382 10029 Cricetulus griseus 100767562
7463 Apis florea 100864431 143995 Megachile rotundata 100876007
9597 Pan paniscus 100993917 9555 Papio anubis 101017476
9595 Gorilla gorilla 101129297 10090 Mus musculus 19724
10116 Rattus norvegicus 288906 9615 Canis familiaris 484908
28377 Anolis carolinensis ENSACAG00000015671 9646 Ailuropoda melanoleuca ENSAMEG00000013075
9483 Callithrix jacchus ENSCJAG00000004970 10141 Cavia porcellus ENSCPOG00000010089
10020 Dipodomys ordii ENSDORG00000016506 9796 Equus caballus ENSECAG00000016589
9371 Echinops telfairi ENSETEG00000003677 69293 Gasterosteus aculeatus ENSGACG00000012429
8049 Gadus morhua ENSGMOG00000008963 7897 Latimeria chalumnae ENSLACG00000022433
9785 Loxodonta africana ENSLAFG00000010160 9315 Macropus eugenii ENSMEUG00000009014
30608 Microcebus murinus ENSMICG00000012036 59463 Myotis lucifugus ENSMLUG00000013002
8128 Oreochromis niloticus ENSONIG00000002158 9978 Ochotona princeps ENSOPRG00000003641
8090 Oryzias latipes ENSORLG00000010273 9601 Pongo abelii ENSPPYG00000009631
13735 Pelodiscus sinensis ENSPSIG00000016113 132908 Pteropus vampyrus ENSPVAG00000017549
43179 Ictidomys tridecemlineatus ENSSTOG00000025432 37347 Tupaia belangeri ENSTBEG00000014646
99883 Tetraodon nigroviridis ENSTNIG00000003294 31033 Takifugu rubripes ENSTRUG00000012387
9739 Tursiops truncatus ENSTTRG00000008377 8364 Xenopus tropicalis ENSXETG00000005567
8083 Xiphophorus maculatus ENSXMAG00000014267 9685 Felis catus ENSFCAG00000003721
13616 Monodelphis domestica ENSMODG00000012044 9669 Mustela putorius furo ENSMPUG00000003132
9813 Procavia capensis ENSPCAG00000010006 9305 Sarcophilus harrisii ENSSHAG00000009998