Basic Information | |||
Gene ID | ENSDARG00000005883 | ||
Gene Name | rfx1a | ||
Full Name | Uncharacterized protein | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | E7EZ03 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000104544 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 365 | 438 | 2.60e-40 | Winged helix-turn-helix DNA-binding domain |
ENSDARP00000104544 | Pfam | PF02257 | IPR003150 | 364 | 440 | 4.30e-36 | DNA-binding RFX-type winged-helix domain |
ENSDARP00000104544 | Pfam | PF04589 | IPR007668 | 120 | 284 | 5.30e-50 | RFX1 transcription activation region |
ENSDARP00000104544 | ProSiteProfiles | PS51526 | IPR003150 | 364 | 439 | 0.00e-00 | DNA-binding RFX-type winged-helix domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000104544 | PF04589 | 0 | RFX1_trans_act | RFX1 transcription activation region |
ENSDARP00000104544 | PF02257 | 1.2e-36 | RFX_DNA_binding | RFX DNA-binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSDARP00000104544 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSDARP00000104544 | GO:0005634 | cellular_component | nucleus |
ENSDARP00000104544 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
39432 | Saimiri boliviensis | 101037994 | 7425 | Nasonia vitripennis | 100121130 |
7029 | Acyrthosiphon pisum | 100159044 | 10224 | Saccoglossus kowalevskii | 100372282 |
9823 | Sus scrofa | 100511439 | 30195 | Bombus terrestris | 100642228 |
132113 | Bombus impatiens | 100749382 | 10029 | Cricetulus griseus | 100767562 |
7463 | Apis florea | 100864431 | 143995 | Megachile rotundata | 100876007 |
9597 | Pan paniscus | 100993917 | 9555 | Papio anubis | 101017476 |
9595 | Gorilla gorilla | 101129297 | 10090 | Mus musculus | 19724 |
10116 | Rattus norvegicus | 288906 | 9615 | Canis familiaris | 484908 |
28377 | Anolis carolinensis | ENSACAG00000015671 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000013075 |
9483 | Callithrix jacchus | ENSCJAG00000004970 | 10141 | Cavia porcellus | ENSCPOG00000010089 |
10020 | Dipodomys ordii | ENSDORG00000016506 | 9796 | Equus caballus | ENSECAG00000016589 |
9371 | Echinops telfairi | ENSETEG00000003677 | 69293 | Gasterosteus aculeatus | ENSGACG00000012429 |
8049 | Gadus morhua | ENSGMOG00000008963 | 7897 | Latimeria chalumnae | ENSLACG00000022433 |
9785 | Loxodonta africana | ENSLAFG00000010160 | 9315 | Macropus eugenii | ENSMEUG00000009014 |
30608 | Microcebus murinus | ENSMICG00000012036 | 59463 | Myotis lucifugus | ENSMLUG00000013002 |
8128 | Oreochromis niloticus | ENSONIG00000002158 | 9978 | Ochotona princeps | ENSOPRG00000003641 |
8090 | Oryzias latipes | ENSORLG00000010273 | 9601 | Pongo abelii | ENSPPYG00000009631 |
13735 | Pelodiscus sinensis | ENSPSIG00000016113 | 132908 | Pteropus vampyrus | ENSPVAG00000017549 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000025432 | 37347 | Tupaia belangeri | ENSTBEG00000014646 |
99883 | Tetraodon nigroviridis | ENSTNIG00000003294 | 31033 | Takifugu rubripes | ENSTRUG00000012387 |
9739 | Tursiops truncatus | ENSTTRG00000008377 | 8364 | Xenopus tropicalis | ENSXETG00000005567 |
8083 | Xiphophorus maculatus | ENSXMAG00000014267 | 9685 | Felis catus | ENSFCAG00000003721 |
13616 | Monodelphis domestica | ENSMODG00000012044 | 9669 | Mustela putorius furo | ENSMPUG00000003132 |
9813 | Procavia capensis | ENSPCAG00000010006 | 9305 | Sarcophilus harrisii | ENSSHAG00000009998 |