Basic Information | |||
Gene ID | ENSORLG00000017755 | ||
Gene Name | sox21 | ||
Full Name | Uncharacterized protein | ||
Organism | Oryzias latipes [8090] |
Cross Reference | |||
UniProt | H2MTW5 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSORLP00000022225 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 6 | 87 | 3.70e-41 | High mobility group box domain |
ENSORLP00000022225 | Pfam | PF00505 | IPR009071 | 8 | 76 | 2.60e-27 | High mobility group box domain |
ENSORLP00000022225 | Pfam | PF12336 | IPR022097 | 77 | 98 | 1.50e-05 | Transcription factor SOX |
ENSORLP00000022225 | ProSiteProfiles | PS50118 | IPR009071 | 8 | 76 | 0.00e-00 | High mobility group box domain |
ENSORLP00000022225 | SMART | SM00398 | IPR009071 | 7 | 77 | 2.40e-31 | High mobility group box domain |
ENSORLP00000022225 | SUPERFAMILY | SSF47095 | IPR009071 | 3 | 80 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSORLP00000022225 | PF00505 | 1.7e-27 | HMG_box | HMG (high mobility group) box |
ENSORLP00000022225 | PF09011 | 3.3e-11 | HMG_box_2 | HMG-box domain |
ENSORLP00000022225 | PF12336 | 7.2e-06 | SOXp | SOX transcription factor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSORLP00000022225 | GO:0000122 | biological_process | negative regulation of transcription from RNA polymerase II promoter |
ENSORLP00000022225 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSORLP00000022225 | GO:0045892 | biological_process | negative regulation of transcription, DNA-templated |
ENSORLP00000022225 | GO:0005634 | cellular_component | nucleus |
ENSORLP00000022225 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100019887 | 8083 | Xiphophorus maculatus | 102230267 |
7897 | Latimeria chalumnae | 102359787 | 10090 | Mus musculus | 223227 |
9544 | Macaca mulatta | 695074 | 9358 | Choloepus hoffmanni | ENSCHOG00000012015 |
69293 | Gasterosteus aculeatus | ENSGACG00000004124 | 8049 | Gadus morhua | ENSGMOG00000019987 |
59729 | Taeniopygia guttata | ENSTGUG00000011206 |
Paralogs | |||
101162114 |