Basic Information | |||
Gene ID | ENSRNOG00000005886 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Zscan20 | ||
Full Name | Protein Zscan20 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | D3ZCC2 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000008887 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 1005 | 1030 | 1.10e-14 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000008887 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 699 | 727 | 1.10e-06 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000008887 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 728 | 748 | 1.10e-12 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000008887 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 749 | 775 | 1.80e-17 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000008887 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 776 | 807 | 3.20e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000008887 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 862 | 893 | 5.50e-16 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000008887 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 894 | 921 | 1.50e-16 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000008887 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 922 | 949 | 2.40e-16 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000008887 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 950 | 977 | 2.90e-19 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000008887 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 978 | 1004 | 1.40e-20 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000008887 | Pfam | PF00096 | IPR007087 | 756 | 778 | 6.70e-07 | Zinc finger, C2H2 |
ENSRNOP00000008887 | Pfam | PF02023 | IPR003309 | 40 | 131 | 1.10e-40 | Transcription regulator SCAN |
ENSRNOP00000008887 | ProSitePatterns | PS00028 | IPR007087 | 1006 | 1026 | - | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSitePatterns | PS00028 | IPR007087 | 758 | 778 | - | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSitePatterns | PS00028 | IPR007087 | 866 | 886 | - | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSitePatterns | PS00028 | IPR007087 | 894 | 914 | - | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSitePatterns | PS00028 | IPR007087 | 922 | 942 | - | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSitePatterns | PS00028 | IPR007087 | 950 | 970 | - | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSitePatterns | PS00028 | IPR007087 | 978 | 998 | - | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSiteProfiles | PS50157 | IPR007087 | 1004 | 1031 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSiteProfiles | PS50157 | IPR007087 | 700 | 727 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSiteProfiles | PS50157 | IPR007087 | 728 | 755 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSiteProfiles | PS50157 | IPR007087 | 756 | 783 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSiteProfiles | PS50157 | IPR007087 | 864 | 891 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSiteProfiles | PS50157 | IPR007087 | 892 | 919 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSiteProfiles | PS50157 | IPR007087 | 920 | 947 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSiteProfiles | PS50157 | IPR007087 | 948 | 975 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSiteProfiles | PS50157 | IPR007087 | 976 | 1003 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000008887 | ProSiteProfiles | PS50804 | IPR003309 | 45 | 126 | 0.00e-00 | Transcription regulator SCAN |
ENSRNOP00000008887 | SMART | SM00355 | IPR015880 | 1004 | 1026 | 4.80e-06 | Zinc finger, C2H2-like |
ENSRNOP00000008887 | SMART | SM00355 | IPR015880 | 728 | 750 | 4.70e-02 | Zinc finger, C2H2-like |
ENSRNOP00000008887 | SMART | SM00355 | IPR015880 | 756 | 778 | 3.20e-07 | Zinc finger, C2H2-like |
ENSRNOP00000008887 | SMART | SM00355 | IPR015880 | 864 | 886 | 1.80e-06 | Zinc finger, C2H2-like |
ENSRNOP00000008887 | SMART | SM00355 | IPR015880 | 892 | 914 | 4.10e-06 | Zinc finger, C2H2-like |
ENSRNOP00000008887 | SMART | SM00355 | IPR015880 | 920 | 942 | 4.30e-04 | Zinc finger, C2H2-like |
ENSRNOP00000008887 | SMART | SM00355 | IPR015880 | 948 | 970 | 5.10e-08 | Zinc finger, C2H2-like |
ENSRNOP00000008887 | SMART | SM00355 | IPR015880 | 976 | 998 | 1.20e-06 | Zinc finger, C2H2-like |
ENSRNOP00000008887 | SMART | SM00431 | IPR003309 | 41 | 154 | 3.40e-57 | Transcription regulator SCAN |
ENSRNOP00000008887 | SMART | SM00717 | IPR001005 | 314 | 378 | 3.10e-03 | SANT/Myb domain |
ENSRNOP00000008887 | SMART | SM00717 | IPR001005 | 475 | 539 | 9.40e-05 | SANT/Myb domain |
ENSRNOP00000008887 | SUPERFAMILY | SSF47353 | IPR008916 | 40 | 127 | 0.00e-00 | Retrovirus capsid, C-terminal |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000008887 | PF13465 | 0 | zf-H2C2_2 | Zinc-finger double domain |
ENSRNOP00000008887 | PF00096 | 1.60028e-42 | zf-C2H2 | Zinc finger, C2H2 type |
ENSRNOP00000008887 | PF02023 | 4.39994e-41 | SCAN | SCAN domain |
ENSRNOP00000008887 | PF13837 | 8.9e-35 | Myb_DNA-bind_4 | Myb/SANT-like DNA-binding domain |
ENSRNOP00000008887 | PF13912 | 4.5e-15 | zf-C2H2_6 | C2H2-type zinc finger |
ENSRNOP00000008887 | PF13894 | 7.7e-15 | zf-C2H2_4 | C2H2-type zinc finger |
ENSRNOP00000008887 | PF12171 | 4.1e-12 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
ENSRNOP00000008887 | PF13921 | 8.9e-08 | Myb_DNA-bind_6 | Myb-like DNA-binding domain |
ENSRNOP00000008887 | PF13873 | 3.8e-05 | Myb_DNA-bind_5 | Myb/SANT-like DNA-binding domain |
ENSRNOP00000008887 | PF12776 | 0.00016 | Myb_DNA-bind_3 | Myb/SANT-like DNA-binding domain |
ENSRNOP00000008887 | PF10545 | 0.0003 | MADF_DNA_bdg | Alcohol dehydrogenase transcription factor Myb/SANT-like |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000008887 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000008887 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000008887 | GO:0003677 | molecular_function | DNA binding |
ENSRNOP00000008887 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9483 | Callithrix jacchus | 100407211 | 9823 | Sus scrofa | 100522553 |
10029 | Cricetulus griseus | 100773696 | 9597 | Pan paniscus | 100987423 |
9555 | Papio anubis | 101021301 | 39432 | Saimiri boliviensis | 101032996 |
9595 | Gorilla gorilla | 101138257 | 9669 | Mustela putorius furo | 101692652 |
10090 | Mus musculus | 269585 | 9544 | Macaca mulatta | 710291 |
9606 | Homo sapiens | 7579 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000007237 |
9913 | Bos taurus | ENSBTAG00000019555 | 9615 | Canis familiaris | ENSCAFG00000031958 |
9358 | Choloepus hoffmanni | ENSCHOG00000003652 | 10141 | Cavia porcellus | ENSCPOG00000023591 |
9361 | Dasypus novemcinctus | ENSDNOG00000019374 | 10020 | Dipodomys ordii | ENSDORG00000014076 |
9365 | Erinaceus europaeus | ENSEEUG00000011661 | 9371 | Echinops telfairi | ENSETEG00000018909 |
9685 | Felis catus | ENSFCAG00000002405 | 9785 | Loxodonta africana | ENSLAFG00000022272 |
9315 | Macropus eugenii | ENSMEUG00000005241 | 59463 | Myotis lucifugus | ENSMLUG00000015569 |
9258 | Ornithorhynchus anatinus | ENSOANG00000004475 | 9978 | Ochotona princeps | ENSOPRG00000006227 |
9813 | Procavia capensis | ENSPCAG00000012692 | 9601 | Pongo abelii | ENSPPYG00000001572 |
132908 | Pteropus vampyrus | ENSPVAG00000005899 | 9796 | Equus caballus | ENSECAG00000012735 |
13616 | Monodelphis domestica | ENSMODG00000017129 | 30611 | Otolemur garnettii | ENSOGAG00000012741 |
42254 | Sorex araneus | ENSSARG00000010302 | 9305 | Sarcophilus harrisii | ENSSHAG00000006099 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000009061 | 37347 | Tupaia belangeri | ENSTBEG00000012045 |
9478 | Tarsius syrichta | ENSTSYG00000000999 | 9739 | Tursiops truncatus | ENSTTRG00000002211 |
30538 | Vicugna pacos | ENSVPAG00000005039 |