Basic Information
Gene ID ENSRNOG00000005996 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Lhx6
Full Name Protein Lhx6
Organism Rattus norvegicus [10116]

Cross Reference
UniProt D3ZDG6 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000008817 Gene3D G3DSA:1.10.10.60 IPR009057 237 305 2.50e-25 Homeodomain-like
ENSRNOP00000008817 Gene3D G3DSA:2.10.110.10 IPR001781 162 218 3.60e-15 Zinc finger, LIM-type
ENSRNOP00000008817 Gene3D G3DSA:2.10.110.10 IPR001781 95 161 1.30e-16 Zinc finger, LIM-type
ENSRNOP00000008817 Pfam PF00046 IPR001356 249 305 2.20e-19 Homeobox domain
ENSRNOP00000008817 Pfam PF00412 IPR001781 160 214 2.40e-15 Zinc finger, LIM-type
ENSRNOP00000008817 Pfam PF00412 IPR001781 99 156 2.10e-14 Zinc finger, LIM-type
ENSRNOP00000008817 ProSitePatterns PS00027 IPR017970 281 304 - Homeobox, conserved site
ENSRNOP00000008817 ProSitePatterns PS00478 IPR001781 160 195 - Zinc finger, LIM-type
ENSRNOP00000008817 ProSitePatterns PS00478 IPR001781 99 133 - Zinc finger, LIM-type
ENSRNOP00000008817 ProSiteProfiles PS50023 IPR001781 158 220 0.00e-00 Zinc finger, LIM-type
ENSRNOP00000008817 ProSiteProfiles PS50023 IPR001781 97 157 0.00e-00 Zinc finger, LIM-type
ENSRNOP00000008817 ProSiteProfiles PS50071 IPR001356 246 306 0.00e-00 Homeobox domain
ENSRNOP00000008817 SMART SM00132 IPR001781 159 213 1.20e-19 Zinc finger, LIM-type
ENSRNOP00000008817 SMART SM00132 IPR001781 98 151 2.90e-15 Zinc finger, LIM-type
ENSRNOP00000008817 SMART SM00389 IPR001356 248 310 4.50e-26 Homeobox domain
ENSRNOP00000008817 SUPERFAMILY SSF46689 IPR009057 239 306 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000008817 PF00412 2.8e-30 LIM LIM domain
ENSRNOP00000008817 PF00046 1.3e-19 Homeobox Homeobox domain
ENSRNOP00000008817 PF05920 0.0007 Homeobox_KN Homeobox KN domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000008817 GO:0005634 cellular_component nucleus
ENSRNOP00000008817 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSRNOP00000008817 GO:0008270 molecular_function zinc ion binding
ENSRNOP00000008817 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100116711 7029 Acyrthosiphon pisum 100166565
10224 Saccoglossus kowalevskii 100372943 9601 Pongo abelii 100444419
10029 Cricetulus griseus 100769913 7463 Apis florea 100872593
143995 Megachile rotundata 100878746 34638 Metaseiulus occidentalis 100907946
9597 Pan paniscus 100991624 9555 Papio anubis 101025241
31033 Takifugu rubripes 101069278 8083 Xiphophorus maculatus 102229177
6239 Caenorhabditis elegans 180672 9606 Homo sapiens 26468
9913 Bos taurus 541261 7070 Tribolium castaneum 659841
7460 Apis mellifera 725532 28377 Anolis carolinensis ENSACAG00000011289
10141 Cavia porcellus ENSCPOG00000010682 9361 Dasypus novemcinctus ENSDNOG00000002579
10020 Dipodomys ordii ENSDORG00000015860 69293 Gasterosteus aculeatus ENSGACG00000017345
9031 Gallus gallus ENSGALG00000001347 9595 Gorilla gorilla ENSGGOG00000008310
8049 Gadus morhua ENSGMOG00000016580 7897 Latimeria chalumnae ENSLACG00000009230
9785 Loxodonta africana ENSLAFG00000012133 9315 Macropus eugenii ENSMEUG00000011180
9103 Meleagris gallopavo ENSMGAG00000012149 59463 Myotis lucifugus ENSMLUG00000004783
61853 Nomascus leucogenys ENSNLEG00000018062 9258 Ornithorhynchus anatinus ENSOANG00000004698
9986 Oryctolagus cuniculus ENSOCUG00000008522 30611 Otolemur garnettii ENSOGAG00000015097
9978 Ochotona princeps ENSOPRG00000010365 8090 Oryzias latipes ENSORLG00000009953
9813 Procavia capensis ENSPCAG00000007588 13735 Pelodiscus sinensis ENSPSIG00000013837
9598 Pan troglodytes ENSPTRG00000001814 132908 Pteropus vampyrus ENSPVAG00000000862
13616 Monodelphis domestica 100014160 9483 Callithrix jacchus 100392368
30195 Bombus terrestris 100650334 8128 Oreochromis niloticus 100707712
132113 Bombus impatiens 100747481 39432 Saimiri boliviensis 101034291
9669 Mustela putorius furo 101674221 10090 Mus musculus 16874
7227 Drosophila melanogaster 38451 7955 Danio rerio 445565
7668 Strongylocentrotus purpuratus 579936 9646 Ailuropoda melanoleuca ENSAMEG00000000780
9615 Canis familiaris ENSCAFG00000020277 9358 Choloepus hoffmanni ENSCHOG00000004170
9796 Equus caballus ENSECAG00000004881 9365 Erinaceus europaeus ENSEEUG00000015531
9371 Echinops telfairi ENSETEG00000009829 9685 Felis catus ENSFCAG00000018842
30608 Microcebus murinus ENSMICG00000016150 9544 Macaca mulatta ENSMMUG00000011453
9305 Sarcophilus harrisii ENSSHAG00000011957 9823 Sus scrofa ENSSSCG00000005530
37347 Tupaia belangeri ENSTBEG00000002448 30538 Vicugna pacos ENSVPAG00000001409
42254 Sorex araneus ENSSARG00000006321 43179 Ictidomys tridecemlineatus ENSSTOG00000012618
59729 Taeniopygia guttata ENSTGUG00000006782 99883 Tetraodon nigroviridis ENSTNIG00000009140
9478 Tarsius syrichta ENSTSYG00000012331 9739 Tursiops truncatus ENSTTRG00000007103
8364 Xenopus tropicalis ENSXETG00000016325