Basic Information | |||
Gene ID | ENSRNOG00000005996 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Lhx6 | ||
Full Name | Protein Lhx6 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | D3ZDG6 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000008817 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 237 | 305 | 2.50e-25 | Homeodomain-like |
ENSRNOP00000008817 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 162 | 218 | 3.60e-15 | Zinc finger, LIM-type |
ENSRNOP00000008817 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 95 | 161 | 1.30e-16 | Zinc finger, LIM-type |
ENSRNOP00000008817 | Pfam | PF00046 | IPR001356 | 249 | 305 | 2.20e-19 | Homeobox domain |
ENSRNOP00000008817 | Pfam | PF00412 | IPR001781 | 160 | 214 | 2.40e-15 | Zinc finger, LIM-type |
ENSRNOP00000008817 | Pfam | PF00412 | IPR001781 | 99 | 156 | 2.10e-14 | Zinc finger, LIM-type |
ENSRNOP00000008817 | ProSitePatterns | PS00027 | IPR017970 | 281 | 304 | - | Homeobox, conserved site |
ENSRNOP00000008817 | ProSitePatterns | PS00478 | IPR001781 | 160 | 195 | - | Zinc finger, LIM-type |
ENSRNOP00000008817 | ProSitePatterns | PS00478 | IPR001781 | 99 | 133 | - | Zinc finger, LIM-type |
ENSRNOP00000008817 | ProSiteProfiles | PS50023 | IPR001781 | 158 | 220 | 0.00e-00 | Zinc finger, LIM-type |
ENSRNOP00000008817 | ProSiteProfiles | PS50023 | IPR001781 | 97 | 157 | 0.00e-00 | Zinc finger, LIM-type |
ENSRNOP00000008817 | ProSiteProfiles | PS50071 | IPR001356 | 246 | 306 | 0.00e-00 | Homeobox domain |
ENSRNOP00000008817 | SMART | SM00132 | IPR001781 | 159 | 213 | 1.20e-19 | Zinc finger, LIM-type |
ENSRNOP00000008817 | SMART | SM00132 | IPR001781 | 98 | 151 | 2.90e-15 | Zinc finger, LIM-type |
ENSRNOP00000008817 | SMART | SM00389 | IPR001356 | 248 | 310 | 4.50e-26 | Homeobox domain |
ENSRNOP00000008817 | SUPERFAMILY | SSF46689 | IPR009057 | 239 | 306 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000008817 | PF00412 | 2.8e-30 | LIM | LIM domain |
ENSRNOP00000008817 | PF00046 | 1.3e-19 | Homeobox | Homeobox domain |
ENSRNOP00000008817 | PF05920 | 0.0007 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000008817 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000008817 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSRNOP00000008817 | GO:0008270 | molecular_function | zinc ion binding |
ENSRNOP00000008817 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100116711 | 7029 | Acyrthosiphon pisum | 100166565 |
10224 | Saccoglossus kowalevskii | 100372943 | 9601 | Pongo abelii | 100444419 |
10029 | Cricetulus griseus | 100769913 | 7463 | Apis florea | 100872593 |
143995 | Megachile rotundata | 100878746 | 34638 | Metaseiulus occidentalis | 100907946 |
9597 | Pan paniscus | 100991624 | 9555 | Papio anubis | 101025241 |
31033 | Takifugu rubripes | 101069278 | 8083 | Xiphophorus maculatus | 102229177 |
6239 | Caenorhabditis elegans | 180672 | 9606 | Homo sapiens | 26468 |
9913 | Bos taurus | 541261 | 7070 | Tribolium castaneum | 659841 |
7460 | Apis mellifera | 725532 | 28377 | Anolis carolinensis | ENSACAG00000011289 |
10141 | Cavia porcellus | ENSCPOG00000010682 | 9361 | Dasypus novemcinctus | ENSDNOG00000002579 |
10020 | Dipodomys ordii | ENSDORG00000015860 | 69293 | Gasterosteus aculeatus | ENSGACG00000017345 |
9031 | Gallus gallus | ENSGALG00000001347 | 9595 | Gorilla gorilla | ENSGGOG00000008310 |
8049 | Gadus morhua | ENSGMOG00000016580 | 7897 | Latimeria chalumnae | ENSLACG00000009230 |
9785 | Loxodonta africana | ENSLAFG00000012133 | 9315 | Macropus eugenii | ENSMEUG00000011180 |
9103 | Meleagris gallopavo | ENSMGAG00000012149 | 59463 | Myotis lucifugus | ENSMLUG00000004783 |
61853 | Nomascus leucogenys | ENSNLEG00000018062 | 9258 | Ornithorhynchus anatinus | ENSOANG00000004698 |
9986 | Oryctolagus cuniculus | ENSOCUG00000008522 | 30611 | Otolemur garnettii | ENSOGAG00000015097 |
9978 | Ochotona princeps | ENSOPRG00000010365 | 8090 | Oryzias latipes | ENSORLG00000009953 |
9813 | Procavia capensis | ENSPCAG00000007588 | 13735 | Pelodiscus sinensis | ENSPSIG00000013837 |
9598 | Pan troglodytes | ENSPTRG00000001814 | 132908 | Pteropus vampyrus | ENSPVAG00000000862 |
13616 | Monodelphis domestica | 100014160 | 9483 | Callithrix jacchus | 100392368 |
30195 | Bombus terrestris | 100650334 | 8128 | Oreochromis niloticus | 100707712 |
132113 | Bombus impatiens | 100747481 | 39432 | Saimiri boliviensis | 101034291 |
9669 | Mustela putorius furo | 101674221 | 10090 | Mus musculus | 16874 |
7227 | Drosophila melanogaster | 38451 | 7955 | Danio rerio | 445565 |
7668 | Strongylocentrotus purpuratus | 579936 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000000780 |
9615 | Canis familiaris | ENSCAFG00000020277 | 9358 | Choloepus hoffmanni | ENSCHOG00000004170 |
9796 | Equus caballus | ENSECAG00000004881 | 9365 | Erinaceus europaeus | ENSEEUG00000015531 |
9371 | Echinops telfairi | ENSETEG00000009829 | 9685 | Felis catus | ENSFCAG00000018842 |
30608 | Microcebus murinus | ENSMICG00000016150 | 9544 | Macaca mulatta | ENSMMUG00000011453 |
9305 | Sarcophilus harrisii | ENSSHAG00000011957 | 9823 | Sus scrofa | ENSSSCG00000005530 |
37347 | Tupaia belangeri | ENSTBEG00000002448 | 30538 | Vicugna pacos | ENSVPAG00000001409 |
42254 | Sorex araneus | ENSSARG00000006321 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000012618 |
59729 | Taeniopygia guttata | ENSTGUG00000006782 | 99883 | Tetraodon nigroviridis | ENSTNIG00000009140 |
9478 | Tarsius syrichta | ENSTSYG00000012331 | 9739 | Tursiops truncatus | ENSTTRG00000007103 |
8364 | Xenopus tropicalis | ENSXETG00000016325 |