Basic Information
Gene ID ENSRNOG00000011306 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Myod1; rCG_53643
Full Name Myoblast determination protein 1
Organism Rattus norvegicus [10116]

Cross Reference
UniProt A0JPK9 UniGene Rn.9493
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 10116.ENSRNOP00000015109

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000015109 Gene3D G3DSA:4.10.280.10 IPR011598 100 165 1.50e-29 Myc-type, basic helix-loop-helix (bHLH) domain
ENSRNOP00000015109 Pfam PF00010 IPR011598 110 161 5.60e-15 Myc-type, basic helix-loop-helix (bHLH) domain
ENSRNOP00000015109 Pfam PF01586 IPR002546 22 109 2.70e-28 Myogenic basic muscle-specific protein
ENSRNOP00000015109 Pfam PF12232 IPR022032 190 258 1.90e-25 Myogenic determination factor 5
ENSRNOP00000015109 ProSiteProfiles PS50888 IPR011598 109 160 0.00e-00 Myc-type, basic helix-loop-helix (bHLH) domain
ENSRNOP00000015109 SMART SM00353 IPR011598 115 166 5.00e-18 Myc-type, basic helix-loop-helix (bHLH) domain
ENSRNOP00000015109 SMART SM00520 IPR002546 1 114 1.50e-63 Myogenic basic muscle-specific protein
ENSRNOP00000015109 SUPERFAMILY SSF47459 IPR011598 108 169 0.00e-00 Myc-type, basic helix-loop-helix (bHLH) domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000015109 PF01586 1.3e-28 Basic Myogenic Basic domain
ENSRNOP00000015109 PF12232 1.9e-25 Myf5 Myogenic determination factor 5
ENSRNOP00000015109 PF00010 3.2e-15 HLH Helix-loop-helix DNA-binding domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000015109 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000015109 GO:0007517 biological_process muscle organ development
ENSRNOP00000015109 GO:0043966 biological_process histone H3 acetylation
ENSRNOP00000015109 GO:0043967 biological_process histone H4 acetylation
ENSRNOP00000015109 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSRNOP00000015109 GO:0071392 biological_process cellular response to estradiol stimulus
ENSRNOP00000015109 GO:0005634 cellular_component nucleus
ENSRNOP00000015109 GO:0005667 cellular_component transcription factor complex
ENSRNOP00000015109 GO:0001047 molecular_function core promoter binding
ENSRNOP00000015109 GO:0003677 molecular_function DNA binding
ENSRNOP00000015109 GO:0031490 molecular_function chromatin DNA binding
ENSRNOP00000015109 GO:0046983 molecular_function protein dimerization activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9601 Pongo abelii 100451999 8128 Oreochromis niloticus 100534488
30195 Bombus terrestris 100642478 9597 Pan paniscus 100981988
9555 Papio anubis 101009599 39432 Saimiri boliviensis 101042924
9685 Felis catus 101097667 9669 Mustela putorius furo 101682575
43179 Ictidomys tridecemlineatus 101966425 7955 Danio rerio 30513
31033 Takifugu rubripes 446036 9615 Canis familiaris 611940
9361 Dasypus novemcinctus ENSDNOG00000017164 9031 Gallus gallus ENSGALG00000006216
8049 Gadus morhua ENSGMOG00000011389 9315 Macropus eugenii ENSMEUG00000014270
30608 Microcebus murinus ENSMICG00000005566 9978 Ochotona princeps ENSOPRG00000002390
9813 Procavia capensis ENSPCAG00000001317 7425 Nasonia vitripennis 100123796
59729 Taeniopygia guttata 100232528 10224 Saccoglossus kowalevskii 100302710
10141 Cavia porcellus 100717629 132113 Bombus impatiens 100745308
7463 Apis florea 100867910 143995 Megachile rotundata 100875133
9305 Sarcophilus harrisii 100923982 30611 Otolemur garnettii 100941493
9595 Gorilla gorilla 101130809 59463 Myotis lucifugus 102419839
7668 Strongylocentrotus purpuratus 373197 9606 Homo sapiens 4654
9371 Echinops telfairi ENSETEG00000003979 69293 Gasterosteus aculeatus ENSGACG00000008444
7897 Latimeria chalumnae ENSLACG00000014430 9103 Meleagris gallopavo ENSMGAG00000007210
9986 Oryctolagus cuniculus ENSOCUG00000021405 8090 Oryzias latipes ENSORLG00000000694
132908 Pteropus vampyrus ENSPVAG00000012829 42254 Sorex araneus ENSSARG00000002401
37347 Tupaia belangeri ENSTBEG00000003438 9478 Tarsius syrichta ENSTSYG00000014042
8083 Xiphophorus maculatus ENSXMAG00000007430 9823 Sus scrofa ENSSSCG00000013375
99883 Tetraodon nigroviridis ENSTNIG00000002808 9739 Tursiops truncatus ENSTTRG00000013869
8364 Xenopus tropicalis ENSXETG00000001320