Basic Information | |||
Gene ID | ENSRNOG00000023433 ; ![]() ![]() | ||
Gene Name | Gata6 | ||
Full Name | Transcription factor GATA-6 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | F1M7P7 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000036967 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 378 | 431 | 4.00e-24 | Zinc finger, NHR/GATA-type |
ENSRNOP00000036967 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 432 | 489 | 3.00e-28 | Zinc finger, NHR/GATA-type |
ENSRNOP00000036967 | PANTHER | PTHR10071:SF23 | IPR028437 | 1 | 585 | 0.00e-00 | Transcription factor GATA-6 |
ENSRNOP00000036967 | Pfam | PF00320 | IPR000679 | 383 | 416 | 8.00e-15 | Zinc finger, GATA-type |
ENSRNOP00000036967 | Pfam | PF00320 | IPR000679 | 437 | 470 | 5.20e-16 | Zinc finger, GATA-type |
ENSRNOP00000036967 | Pfam | PF05349 | IPR008013 | 147 | 374 | 1.60e-57 | GATA-type transcription activator, N-terminal |
ENSRNOP00000036967 | PRINTS | PR00619 | IPR000679 | 379 | 396 | 4.50e-14 | Zinc finger, GATA-type |
ENSRNOP00000036967 | PRINTS | PR00619 | IPR000679 | 397 | 414 | 4.50e-14 | Zinc finger, GATA-type |
ENSRNOP00000036967 | ProSitePatterns | PS00344 | IPR000679 | 383 | 407 | - | Zinc finger, GATA-type |
ENSRNOP00000036967 | ProSitePatterns | PS00344 | IPR000679 | 437 | 461 | - | Zinc finger, GATA-type |
ENSRNOP00000036967 | ProSiteProfiles | PS50114 | IPR000679 | 377 | 431 | 0.00e-00 | Zinc finger, GATA-type |
ENSRNOP00000036967 | ProSiteProfiles | PS50114 | IPR000679 | 431 | 484 | 0.00e-00 | Zinc finger, GATA-type |
ENSRNOP00000036967 | SMART | SM00401 | IPR000679 | 377 | 428 | 2.00e-18 | Zinc finger, GATA-type |
ENSRNOP00000036967 | SMART | SM00401 | IPR000679 | 431 | 481 | 1.60e-26 | Zinc finger, GATA-type |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000036967 | PF05349 | 0 | GATA-N | GATA-type transcription activator, N-terminal |
ENSRNOP00000036967 | PF00320 | 2.4e-31 | GATA | GATA zinc finger |
ENSRNOP00000036967 | PF08271 | 2.5e-06 | TF_Zn_Ribbon | TFIIB zinc-binding |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000036967 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000036967 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSRNOP00000036967 | GO:0045893 | biological_process | positive regulation of transcription, DNA-templated |
ENSRNOP00000036967 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000036967 | GO:0003677 | molecular_function | DNA binding |
ENSRNOP00000036967 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSRNOP00000036967 | GO:0008270 | molecular_function | zinc ion binding |
ENSRNOP00000036967 | GO:0043565 | molecular_function | sequence-specific DNA binding |
ENSRNOP00000036967 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8128 | Oreochromis niloticus | 100690968 | 43179 | Ictidomys tridecemlineatus | 101962010 |
13735 | Pelodiscus sinensis | 102446101 | 6239 | Caenorhabditis elegans | 181250 |
9823 | Sus scrofa | 397600 | 28377 | Anolis carolinensis | ENSACAG00000007786 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000013675 | 9615 | Canis familiaris | ENSCAFG00000023151 |
9358 | Choloepus hoffmanni | ENSCHOG00000011576 | 9601 | Pongo abelii | ENSPPYG00000009057 |
9597 | Pan paniscus | 100982972 | 9555 | Papio anubis | 101001988 |
39432 | Saimiri boliviensis | 101044694 | 9595 | Gorilla gorilla | 101126522 |
7897 | Latimeria chalumnae | 102345745 | 8364 | Xenopus tropicalis | 395062 |
9913 | Bos taurus | ENSBTAG00000005734 | 9483 | Callithrix jacchus | ENSCJAG00000020543 |
10141 | Cavia porcellus | ENSCPOG00000026126 | 7955 | Danio rerio | ENSDARG00000035831 |
9361 | Dasypus novemcinctus | ENSDNOG00000023653 | 10020 | Dipodomys ordii | ENSDORG00000003801 |
9796 | Equus caballus | ENSECAG00000023279 | 9371 | Echinops telfairi | ENSETEG00000005525 |
9685 | Felis catus | ENSFCAG00000027069 | 69293 | Gasterosteus aculeatus | ENSGACG00000017300 |
9031 | Gallus gallus | ENSGALG00000014976 | 8049 | Gadus morhua | ENSGMOG00000011374 |
9785 | Loxodonta africana | ENSLAFG00000007931 | 9315 | Macropus eugenii | ENSMEUG00000011815 |
9103 | Meleagris gallopavo | ENSMGAG00000010008 | 30608 | Microcebus murinus | ENSMICG00000016622 |
59463 | Myotis lucifugus | ENSMLUG00000013566 | 9544 | Macaca mulatta | ENSMMUG00000010944 |
13616 | Monodelphis domestica | ENSMODG00000021492 | 9669 | Mustela putorius furo | ENSMPUG00000005621 |
9986 | Oryctolagus cuniculus | ENSOCUG00000025943 | 8090 | Oryzias latipes | ENSORLG00000017667 |
9813 | Procavia capensis | ENSPCAG00000009996 | 9598 | Pan troglodytes | ENSPTRG00000009913 |
132908 | Pteropus vampyrus | ENSPVAG00000004151 | 59729 | Taeniopygia guttata | ENSTGUG00000010356 |
31033 | Takifugu rubripes | ENSTRUG00000012674 | 9478 | Tarsius syrichta | ENSTSYG00000009547 |
9739 | Tursiops truncatus | ENSTTRG00000013349 | 8083 | Xiphophorus maculatus | ENSXMAG00000005969 |
9305 | Sarcophilus harrisii | ENSSHAG00000006798 | 99883 | Tetraodon nigroviridis | ENSTNIG00000014837 |
Paralogs | |||
85471 |