Basic Information | |||
Gene ID | ENSRNOG00000029813 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Hmgb1; LOC100361707 | ||
Full Name | Uncharacterized protein | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | F1LNG6 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000049627 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 112 | 182 | 9.00e-30 | High mobility group box domain |
ENSRNOP00000049627 | Pfam | PF09011 | IPR009071 | 110 | 182 | 3.70e-27 | High mobility group box domain |
ENSRNOP00000049627 | ProSitePatterns | PS00353 | IPR017967 | 145 | 156 | - | HMG box A DNA-binding domain, conserved site |
ENSRNOP00000049627 | ProSiteProfiles | PS50118 | IPR009071 | 113 | 183 | 0.00e-00 | High mobility group box domain |
ENSRNOP00000049627 | SMART | SM00398 | IPR009071 | 112 | 184 | 2.80e-28 | High mobility group box domain |
ENSRNOP00000049627 | SUPERFAMILY | SSF47095 | IPR009071 | 107 | 185 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000049627 | PF09011 | 2.2e-27 | HMG_box_2 | HMG-box domain |
ENSRNOP00000049627 | PF00505 | 3.8e-16 | HMG_box | HMG (high mobility group) box |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000049627 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000049627 | GO:0005694 | cellular_component | chromosome |
ENSRNOP00000049627 | GO:0003677 | molecular_function | DNA binding |
Paralogs | |||
ENSRNOG00000029654 | ENSRNOG00000032420 | ENSRNOG00000030351 | ENSRNOG00000037945 |
ENSRNOG00000038437 | ENSRNOG00000038953 | ENSRNOG00000039451 | ENSRNOG00000049581 |