Basic Information | |||
Gene ID | ENSXETG00000011968 | ||
Gene Name | arid4a | ||
Full Name | Uncharacterized protein | ||
Organism | Xenopus tropicalis [8364] |
Cross Reference | |||
UniProt | F7EL43 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSXETP00000063751 | Gene3D | G3DSA:1.10.150.60 | IPR001606 | 300 | 411 | 1.40e-36 | ARID/BRIGHT DNA-binding domain |
ENSXETP00000063751 | Pfam | PF01388 | IPR001606 | 306 | 395 | 2.00e-23 | ARID/BRIGHT DNA-binding domain |
ENSXETP00000063751 | Pfam | PF08169 | IPR012603 | 168 | 261 | 4.00e-40 | RBB1NT |
ENSXETP00000063751 | Pfam | PF11717 | IPR025995 | 578 | 631 | 1.90e-13 | RNA binding activity-knot of a chromodomain |
ENSXETP00000063751 | ProSiteProfiles | PS51011 | IPR001606 | 307 | 399 | 0.00e-00 | ARID/BRIGHT DNA-binding domain |
ENSXETP00000063751 | SMART | SM00298 | IPR000953 | 479 | 650 | 6.20e-03 | Chromo domain/shadow |
ENSXETP00000063751 | SMART | SM00333 | IPR002999 | 58 | 114 | 2.50e-09 | Tudor domain |
ENSXETP00000063751 | SMART | SM00501 | IPR001606 | 308 | 400 | 1.10e-39 | ARID/BRIGHT DNA-binding domain |
ENSXETP00000063751 | SUPERFAMILY | SSF46774 | IPR001606 | 302 | 412 | 0.00e-00 | ARID/BRIGHT DNA-binding domain |
ENSXETP00000063751 | SUPERFAMILY | SSF54160 | IPR016197 | 574 | 651 | 0.00e-00 | Chromo domain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSXETP00000063751 | PF08169 | 1.4e-40 | RBB1NT | RBB1NT (NUC162) domain |
ENSXETP00000063751 | PF01388 | 5.4e-24 | ARID | ARID/BRIGHT DNA binding domain |
ENSXETP00000063751 | PF11717 | 5.8e-14 | Tudor-knot | RNA binding activity-knot of a chromodomain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSXETP00000063751 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSXETP00000063751 | GO:0005634 | cellular_component | nucleus |
ENSXETP00000063751 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9823 | Sus scrofa | 100153197 | 9483 | Callithrix jacchus | 100398985 |
9555 | Papio anubis | 101014175 | 39432 | Saimiri boliviensis | 101052484 |
9669 | Mustela putorius furo | 101683878 | 7897 | Latimeria chalumnae | 102356158 |
9606 | Homo sapiens | 5926 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000002532 |
7719 | Ciona intestinalis | ENSCING00000009489 | 10141 | Cavia porcellus | ENSCPOG00000009290 |
9361 | Dasypus novemcinctus | ENSDNOG00000004090 | 9796 | Equus caballus | ENSECAG00000019256 |
9371 | Echinops telfairi | ENSETEG00000014494 | 9785 | Loxodonta africana | ENSLAFG00000008653 |
59463 | Myotis lucifugus | ENSMLUG00000012354 | 9544 | Macaca mulatta | ENSMMUG00000003514 |
9986 | Oryctolagus cuniculus | ENSOCUG00000001052 | 30611 | Otolemur garnettii | ENSOGAG00000000385 |
9978 | Ochotona princeps | ENSOPRG00000002859 | 13735 | Pelodiscus sinensis | ENSPSIG00000014845 |
9305 | Sarcophilus harrisii | ENSSHAG00000018032 | 59729 | Taeniopygia guttata | ENSTGUG00000013032 |
31033 | Takifugu rubripes | ENSTRUG00000008557 | 9478 | Tarsius syrichta | ENSTSYG00000013397 |
9601 | Pongo abelii | 100435571 | 9103 | Meleagris gallopavo | 100547418 |
9597 | Pan paniscus | 100978126 | 10090 | Mus musculus | 238247 |
7955 | Danio rerio | 327404 | 7668 | Strongylocentrotus purpuratus | 589247 |
28377 | Anolis carolinensis | ENSACAG00000014637 | 9358 | Choloepus hoffmanni | ENSCHOG00000003408 |
9365 | Erinaceus europaeus | ENSEEUG00000001510 | 9685 | Felis catus | ENSFCAG00000019223 |
9031 | Gallus gallus | ENSGALG00000012037 | 9595 | Gorilla gorilla | ENSGGOG00000027092 |
8049 | Gadus morhua | ENSGMOG00000017334 | 9315 | Macropus eugenii | ENSMEUG00000003668 |
13616 | Monodelphis domestica | ENSMODG00000007881 | 9258 | Ornithorhynchus anatinus | ENSOANG00000011836 |
8128 | Oreochromis niloticus | ENSONIG00000011016 | 8090 | Oryzias latipes | ENSORLG00000010245 |
9813 | Procavia capensis | ENSPCAG00000002099 | 132908 | Pteropus vampyrus | ENSPVAG00000003866 |
42254 | Sorex araneus | ENSSARG00000006966 | 37347 | Tupaia belangeri | ENSTBEG00000017302 |
99883 | Tetraodon nigroviridis | ENSTNIG00000002593 | 9739 | Tursiops truncatus | ENSTTRG00000013530 |
30538 | Vicugna pacos | ENSVPAG00000003645 | 8083 | Xiphophorus maculatus | ENSXMAG00000004904 |