Basic Information
Gene ID GSOIDP00018081001
Gene Name Ybx1
Full Name Nuclease-sensitive element-binding protein 1
Organism Oikopleura dioica [34765]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
GSOIDP00018081001 CDD cd04458 IPR002059 87 153 1.84e-23 Cold-shock protein, DNA-binding
GSOIDP00018081001 Pfam PF00313 IPR002059 86 154 7.00e-21 Cold-shock protein, DNA-binding
GSOIDP00018081001 PRINTS PR00050 IPR002059 108 117 1.20e-13 Cold-shock protein, DNA-binding
GSOIDP00018081001 PRINTS PR00050 IPR002059 87 102 1.20e-13 Cold-shock protein, DNA-binding
GSOIDP00018081001 PRINTS PR00050 IPR002059 128 146 1.20e-13 Cold-shock protein, DNA-binding
GSOIDP00018081001 ProSitePatterns PS00352 IPR019844 98 117 - Cold-shock conserved site
GSOIDP00018081001 SMART SM00357 IPR011129 86 155 7.00e-18 Cold shock protein
GSOIDP00018081001 SUPERFAMILY SSF50249 IPR012340 83 154 2.06e-18 Nucleic acid-binding, OB-fold

Pfam Annotation
Protein Pfam ID E.value Name Description
GSOIDP00018081001 PF00313 8.4e-22 CSD 'Cold-shock' DNA-binding domain
GSOIDP00018081001 PF02669 0.00091 KdpC K+-transporting ATPase, c chain
GSOIDP00018081001 PF08206 0.0084 OB_RNB Ribonuclease B OB domain

Gene Ontology Annotation
Protein Entry Name Space Description
GSOIDP00018081001 GO:0030529 cellular_component intracellular ribonucleoprotein complex
GSOIDP00018081001 GO:0003723 molecular_function RNA binding