Basic Information | |||
Gene ID | GSOIDP00018081001 | ||
Gene Name | Ybx1 | ||
Full Name | Nuclease-sensitive element-binding protein 1 | ||
Organism | Oikopleura dioica [34765] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
GSOIDP00018081001 | CDD | cd04458 | IPR002059 | 87 | 153 | 1.84e-23 | Cold-shock protein, DNA-binding |
GSOIDP00018081001 | Pfam | PF00313 | IPR002059 | 86 | 154 | 7.00e-21 | Cold-shock protein, DNA-binding |
GSOIDP00018081001 | PRINTS | PR00050 | IPR002059 | 108 | 117 | 1.20e-13 | Cold-shock protein, DNA-binding |
GSOIDP00018081001 | PRINTS | PR00050 | IPR002059 | 87 | 102 | 1.20e-13 | Cold-shock protein, DNA-binding |
GSOIDP00018081001 | PRINTS | PR00050 | IPR002059 | 128 | 146 | 1.20e-13 | Cold-shock protein, DNA-binding |
GSOIDP00018081001 | ProSitePatterns | PS00352 | IPR019844 | 98 | 117 | - | Cold-shock conserved site |
GSOIDP00018081001 | SMART | SM00357 | IPR011129 | 86 | 155 | 7.00e-18 | Cold shock protein |
GSOIDP00018081001 | SUPERFAMILY | SSF50249 | IPR012340 | 83 | 154 | 2.06e-18 | Nucleic acid-binding, OB-fold |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
GSOIDP00018081001 | PF00313 | 8.4e-22 | CSD | 'Cold-shock' DNA-binding domain |
GSOIDP00018081001 | PF02669 | 0.00091 | KdpC | K+-transporting ATPase, c chain |
GSOIDP00018081001 | PF08206 | 0.0084 | OB_RNB | Ribonuclease B OB domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
GSOIDP00018081001 | GO:0030529 | cellular_component | intracellular ribonucleoprotein complex |
GSOIDP00018081001 | GO:0003723 | molecular_function | RNA binding |