Basic Information | |||
Gene ID | Harore.CG.MTP2014.S179.g15322.01.t_1 | ||
Gene Name | LMX1B | ||
Full Name | LIM homeobox transcription factor 1-beta | ||
Organism | Halocynthia roretzi [7729] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
Harore.CG.MTP2014.S1 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 181 | 246 | 7.30e-21 | Homeodomain-like |
Harore.CG.MTP2014.S1 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 5 | 55 | 1.60e-06 | Zinc finger, LIM-type |
Harore.CG.MTP2014.S1 | Pfam | PF00046 | IPR001356 | 195 | 251 | 1.50e-17 | Homeobox domain |
Harore.CG.MTP2014.S1 | Pfam | PF00412 | IPR001781 | 6 | 53 | 5.30e-06 | Zinc finger, LIM-type |
Harore.CG.MTP2014.S1 | ProSitePatterns | PS00027 | IPR017970 | 227 | 250 | - | Homeobox, conserved site |
Harore.CG.MTP2014.S1 | ProSiteProfiles | PS50071 | IPR001356 | 192 | 252 | 1.72e+01 | Homeobox domain |
Harore.CG.MTP2014.S1 | SMART | SM00389 | IPR001356 | 194 | 256 | 2.30e-21 | Homeobox domain |
Harore.CG.MTP2014.S1 | SUPERFAMILY | SSF46689 | IPR009057 | 185 | 252 | 9.41e-19 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
Harore.CG.MTP2014.S1 | PF00046 | 8.5e-19 | Homeobox | Homeobox domain |
Harore.CG.MTP2014.S1 | PF00412 | 5.2e-07 | LIM | LIM domain |
Harore.CG.MTP2014.S1 | PF12144 | 5.1e-05 | Med12-PQL | Eukaryotic Mediator 12 catenin-binding domain |
Harore.CG.MTP2014.S1 | PF05920 | 0.0001 | Homeobox_KN | Homeobox KN domain |