Basic Information | |||
Gene ID | Harore.CG.MTP2014.S649.g11389.01.t_1 | ||
Gene Name | Ybx1 | ||
Full Name | Nuclease-sensitive element-binding protein 1 | ||
Organism | Halocynthia roretzi [7729] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
Harore.CG.MTP2014.S6 | Gene3D | G3DSA:2.40.50.140 | IPR012340 | 28 | 95 | 9.90e-23 | Nucleic acid-binding, OB-fold |
Harore.CG.MTP2014.S6 | Pfam | PF00313 | IPR002059 | 27 | 96 | 9.80e-24 | Cold-shock protein, DNA-binding |
Harore.CG.MTP2014.S6 | PRINTS | PR00050 | IPR002059 | 29 | 44 | 3.90e-19 | Cold-shock protein, DNA-binding |
Harore.CG.MTP2014.S6 | PRINTS | PR00050 | IPR002059 | 69 | 87 | 3.90e-19 | Cold-shock protein, DNA-binding |
Harore.CG.MTP2014.S6 | PRINTS | PR00050 | IPR002059 | 50 | 59 | 3.90e-19 | Cold-shock protein, DNA-binding |
Harore.CG.MTP2014.S6 | ProSitePatterns | PS00352 | IPR019844 | 40 | 59 | - | Cold-shock conserved site |
Harore.CG.MTP2014.S6 | SMART | SM00357 | IPR011129 | 28 | 97 | 5.60e-21 | Cold shock protein |
Harore.CG.MTP2014.S6 | SUPERFAMILY | SSF50249 | IPR012340 | 24 | 96 | 5.88e-20 | Nucleic acid-binding, OB-fold |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
Harore.CG.MTP2014.S6 | PF00313 | 1e-24 | CSD | 'Cold-shock' DNA-binding domain |
Harore.CG.MTP2014.S6 | PF08206 | 0.00037 | OB_RNB | Ribonuclease B OB domain |