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[ Ticket #1086 ] can not refine
Date:
05/04/09 17:22
Submitted by:
jjwest
Assigned to:
unset
Category:
Unset
Priority:
5
Ticket group:
Unset
Resolution:
Unset
Summary:
can not refine
Original submission:
When I try to refine coordinates from pdbs, I get an error:


Error


Message:
fr.unistra.ibmc.paradise.goloka.core.analysis.AnalysisException: java.lang.NullPointerException: null
Level:
SEVERE
Stack Trace:
java.lang.NullPointerException: null
fr.unistra.ibmc.paradise.goloka.services.analysis.rnart.Nuclin.getFileFromBank(Nuclin.java:242)
fr.unistra.ibmc.paradise.goloka.services.analysis.rnart.parsing.NuclinDc.parseNuclinDc(NuclinDc.java:90)
fr.unistra.ibmc.paradise.goloka.services.analysis.rnart.parsing.NuclinDc.<init>(NuclinDc.java:28)
fr.unistra.ibmc.paradise.goloka.services.analysis.rnart.Nuclin.<init>(Nuclin.java:124)
fr.unistra.ibmc.paradise.goloka.services.analysis.rnart.NucMult.<init>(NucMult.java:69)
fr.unistra.ibmc.paradise.goloka.services.analysis.rnart.RnartAnalysis.run(RnartAnalysis.java:148)
fr.unistra.ibmc.paradise.goloka.services.analysis.RequestBehaviour$1AnalysisWorker.doInBackground(RequestBehaviour.java:81)
org.jdesktop.swingworker.SwingWorker$1.call(Unknown Source)
java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
java.util.concurrent.FutureTask.run(FutureTask.java:138)
org.jdesktop.swingworker.SwingWorker.run(Unknown Source)
java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
java.lang.Thread.run(Thread.java:619)


Thanks for the help.
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This happens even after I "auto install" the dependent packages with the script. 05/05/09 11:35 jjwest
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