Not logged in
  • Log in
    Membership (41325+) Group hosting [?] Wiki
    Franklin Award

    About bioinformatics
    Bioinformatics training
    Bioinformatics jobs

    All information groups
    Online databases Online analysis tools Online education tools More tools

    All software groups
    FTP repository
    SVN & CVS repositories [?]
    Mailing lists

    News & Commentary
  • Submit
  • Archives
  • Subscribe

  • Jobs Forum
    (Career Center)
  • Submit
  • Archives
  • Subscribe
  • Career Center - Message forums

    Opportunity: FlyBase InterMine/BioMart developer @ Indiana University--Bloomington, IN (US)
    Submitted by Josh Goodman; posted on Wednesday, August 25, 2010


    FlyBase ( is an online database of Drosophila genes and genomes.


    FlyBase is looking for a qualified software engineer to undertake a project to deploy the InterMine and BioMart data management systems. The developer will be responsible for the web and database aspects of these technologies, which will be hosted at the Indiana University FlyBase site in Bloomington, IN. This includes the initial setup and configuration of these two systems, setting up and automating update cycles in sync with the existing FlyBase release cycle, evaluating the capabilities of each, aiding in the integration of these services with existing FlyBase reports and tools, and coordinating these efforts with other model organism databases (MODs). Loading and preprocessing of data for these systems will be performed at the Harvard University FlyBase site so close coordination with developers there will also be required.


    • BS/MS degree in Biology or related fields
    • Other fields acceptable with sufficient biological experience
    • 2+ years of software development experience
    • Experience with the following technologies:
    • - Perl programming
    • - Java programming (knowledge of JSP a plus)
    • - Linux development environment (system administration skills a plus)
    • - MySQL and PostgreSQL databases
    • - Apache web server
    • - Tomcat Java web application server
    • - InterMine and/or BioMart experience a plus


    Department of Biology at Indiana University Bloomington, IN, USA


    Salary commensurate with qualifications and experience; full benefits included.


    To apply send a cover letter, CV/resume, and contact information for 3 individuals willing to serve as a reference, to [at] using "FlyBase RA" in the subject line or send hard copy to 1001 East Third Street, Bloomington, IN 47405.


    Indiana University is an equal opportunity/affirmative action employer.


    Applications will be accepted until a suitable candidate is identified.

    Expanded view | Monitor forum | Save place

    Start a new thread:
    You have to be logged in to post a reply.


    Copyright © 2019 · Scilico, LLC