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http://www.simonsfoundation.org/flatiron/center-for-computational-biology/ is seeking an experienced software engineer to be the Project Lead for HumanBase (http://hb.flatironinstitute.org), a dynamic and interactive web-based platform that supports thousands of biomedical researchers in exploring the molecular mechanisms of human disease. This position is ideal for an experienced engineering leader with bioinformatics experience who thrives on solving complex problems at the intersection of large-scale data, advanced analytics, and scientific discovery. This is a high-impact role that directly advances the study of human genomics and disease.

The successful candidate will lead technical direction and execution, guide other software engineers, and collaborate closely with researchers at the Center for Computational Biology to translate cutting-edge computational biology into robust software tools. The Project Lead will be a hands-on engineering leader with experience in biological data and -omics technology, as well as a complementary skillset that includes both writing high-quality code and managing a small team of software engineers. Success in this role depends on the ability to translate biological questions into computational solutions, collaborate closely with internal scientific stakeholders, and drive technically rigorous projects that advance our understanding of human biology.

ESSENTIAL FUNCTIONS/RESPONSIBILITIES

  • Serve as technical lead for HumanBase, guiding the design, architecture, and implementation of new features and major infrastructure upgrades
  • Lead and mentor a team of full stack software engineers, ensuring high-quality code, efficient workflows, and continuous professional development
  • Plan, develop, and optimize scalable genomics data processing pipelines
  • Integrate machine learning methods into production pipelines to analyze heterogeneous biological datasets
  • Establish and enforce software engineering best practices, including coding standards, version control, documentation, testing, and deployment workflows
  • Collaborate cross-functionally with computational biologists, data scientists, and external partners to align engineering efforts with scientific goals
  • Stay current with emerging technologies in cloud infrastructure, bioinformatics, and scientific computing and assess their relevance for HumanBase
  • Perform additional duties or projects as assigned

MINIMUM QUALIFICATIONS

Education:
  • B.S. in Computer Science, Software Engineering, or a related technical field
Experience:
  • At least 10 years of professional software experience in software engineering, including leading teams and direct involvement in the planning, design, and development of software
  • Experience collaborating daily with other key team members of different technical and scientific backgrounds
  • Proficiency in full stack software development
  • Extensive experience in Python, including developing data pipelines and software libraries
  • Demonstrated experience with the full software development lifecycle (SDLC), including testing, CI/CD, version control, and deployment
  • Experience building and maintaining web-based interfaces and applications
  • Background in computational biology, bioinformatics, or a related field, with experience developing software in support of biological research
  • Experience working with large, heterogeneous biological datasets – ideally in genomics or biomedical contexts
  • Related Skills & Other Requirements
  • Effective technical leadership and mentorship abilities
  • Excellent communication skills, especially when working across disciplinary boundaries
  • Deep curiosity about science and a passion for building tools that empower scientific discovery
  • Strong sense of ownership and drive for continuous improvement

COMPENSATION

  • The range for full-time annual compensation for this position is $190,000-$235,000 based on experience.
  • In addition to competitive salaries, the Simons Foundation provides employees with an outstanding benefits package.

REQUIRED APPLICATION MATERIALS

  • Please submit a resume and cover letter stating your interest in the position.
Our Commitment to Expanding Pathways to Science & Opportunities for All:

Many of the greatest ideas and discoveries come from a diverse mix of minds, backgrounds, and experiences. The Simons Foundation is committed to advancing basic science and mathematics to benefit humankind and expand our collective understanding of our world. As part of our mission, we support partners, programs, and initiatives that seek to broaden the scientific community and open pathways to science and mathematics careers.

The Simons Foundation provides equal opportunities to all applicants without regard to race, religion, color, age, sex, pregnancy, national origin, sexual orientation, gender identity, genetic disposition, neurodiversity, disability, veteran status, or any other protected category under federal, state, and local law.

HOW TO APPLY

To apply, please visit: https://apptrkr.com/6425350

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DESCRIPTION

The Kravis Department of Integrated Sciences (KDIS) at Claremont McKenna College (CMC) invites applications for a tenure-track Assistant or Associate Professorship in Biology. We seek candidates whose research uses experimental methods in areas such as cell and molecular biology, molecular genetics, genomics, molecular physiology, and molecular evolution. Techniques of particular interest include gene editing and other genetic engineering methods, 3-D tissue and organoid systems, and single cell -omics.

The position will begin on July 1, 2026. The successful candidate is expected to have completed a Ph.D. in Biology or related areas and postdoctoral training by the time of the appointment. Candidates should also have experience teaching and/or mentoring undergraduate students.

KDIS offers an innovative and transformational Integrated Sciences program that is organized around three challenges: Health (Genomics, Systems Biology, and Health), Brain (Brain, Learning, and Decision Sciences), and our Planet (Climate, Energy, and the Environment). The KDIS faculty have a key role in developing and implementing a program that serves as an incubator for new approaches and fosters a culture of inclusion, creativity, and continuous improvement. The department is housed in the new Robert Day Sciences Center.

The candidate must demonstrate potential for establishing an active research program that involves undergraduate students, as evidenced by a track record of high-quality scholarship and a research statement that outlines a clear plan for their research effort at CMC. The candidate must also demonstrate potential for excellence in teaching through a thoughtful teaching statement and supporting evidence from prior teaching experiences.

The teaching load at CMC is two courses per semester. The candidate will help develop and teach a foundational biology curriculum that will be taken by all Integrated Sciences majors and will include integration with the foundational curriculum in chemistry, physics, and computation. Additional teaching will include upper-division courses in cell biology, genetics, physiology, and/or molecular biology, and other upper-division electives in the candidate's area of expertise in support of the department's three themes, and/or a natural science general education course taken by all CMC students.

Given the College's commitment to cultivating an inclusive educational environment, we seek candidates who can demonstrate a commitment to teaching, mentoring, and inspiring students representing a broad range of socioeconomic backgrounds, political opinions, genders, races, ethnicities, nationalities, sexual orientations, and religions. Moreover, as part of its commitment to The Open Academy, the College values freedom of expression, viewpoint diversity, and constructive dialogue.

COMPENSATION

Anticipated Annual Salary Range:

$115,000 - $150,000 per year

HOW TO APPLY

Applications should include a cover letter; curriculum vitae; research statement; teaching statement that addresses the candidate's ability to teach, mentor, and inspire students representing a broad range of backgrounds (optionally, this can be addressed in a separate diversity statement); evidence of teaching effectiveness such as course evaluations; and three representative peer-reviewed publications (either submitted as part of the application materials or links provided from the CV). Applicants must also submit the names and e-mail addresses of three references; an email request will be automatically sent to them with a link to upload their confidential recommendation letter.

Please upload application materials at: https://academicjobsonline.org/ajo/jobs/30228

Review of complete applications will commence on September 15 and will continue until the position is filled. Preliminary interviews will be conducted via Zoom.

ABOUT US

Claremont McKenna College is a highly selective undergraduate institution ranked among the top liberal arts colleges nationally. It is part of The Claremont Colleges, which also includes Pomona College, Scripps College, Harvey Mudd College, Pitzer College, Claremont Graduate University, and Keck Graduate Institute. The Claremont Colleges consortium constitutes an academic community of more than 9,000 students. Claremont is located 35 miles east of downtown Los Angeles.

POLICY

Claremont McKenna College is an equal opportunity employer. In a continuing effort to enrich its academic environment and provide equal educational and employment opportunities, the College actively encourages applications from members of historically under-represented groups in higher education.

POSITION DETAILS

Company: Michabo Health Science Limited
Location: hybrid working
Position: full-time, permanent Scientist
Starting salary: ca. £37k-42k (dependent on experience) plus performance-related bonus pa
Closing date: 31 July 2025

BACKGROUND

Michabo Health Science Limited is an expanding spin-out company from the University of Birmingham. We are leaders in the innovation and application of molecular toxicity data from 'omics technologies to support the hazard assessment of chemicals under European safety legislation. Our mission is to accelerate the world's transition towards safer chemicals without vertebrate animal testing, using molecular toxicity data to identify and characterise exposure-related hazards for regulatory approval.

As interest and confidence in applying metabolomics and transcriptomics technologies to regulatory toxicology grows, so we are growing. We now seek to recruit a skilled Omics Data Scientist, complementing the strengths of our existing team. We succeed because of the strength of our science, our people, and our collaborative approach to working with our clients, who include regulators and chemical companies throughout the UK and Europe, as well as the European Commission. Our core values include fostering teamwork, and earning trust in the approach to our mission through all that we do. We operate hybrid working, with the city of Birmingham, UK, serving as our physical meeting hub.

THE ROLE

A company Scientist role powers the delivery of our projects by conducting and delivering on contract research, assisting in the development of new contract proposals, and contributing to exploratory research in the company's R&D programme. The Scientist works closely with Senior Scientists to conduct investigations and report scientific findings. We provide built-in career progression for Scientists through the learning and development of project planning and management skills, and by specialising in methods continually being improved by our R&D to solve real-world challenges in chemical safety. Our Scientists also co-author research publications.

We seek a proven researcher and team player who speaks our language, the language of 'omics and 'omics data analysis, applied to human or animal biology. Applicants should have a PhD (or equivalent level of expertise) focused on applying metabolomics (primarily) or transcriptomics to either toxicology, human health/disease or perturbation biology. The Scientist will be capable of performing reproducible computational and/or statistical analyses of 'omics data to address toxicological questions, applying their knowledge of R or Python. They will review and incorporate insights from relevant scientific literature and databases to enable data analysis decisions and toxicological interpretation.

Applicants should be motivated to apply their skills towards 21st century regulatory toxicology to help transition towards non-animal toxicity testing. Some knowledge of mechanistic or regulatory toxicology is highly desirable, as is experience working outside of academia. We also invite applications from more experienced candidates for consideration in a more senior role in the company.

HOW TO APPLY

Interested? If you would like more information regarding the job description and skills specification, please contact jobs[at]michabo.co.uk

If you would like to apply, please send a cover letter outlining why you feel you are suitable for the role and a full CV to jobs[at]michabo.co.uk by 31 July 2025. Please include how you heard about this advert.

The Max Planck Society is one of the leading research organizations in Europe. We offer challenging tasks with a high degree of personal responsibility and creative freedom in research laboratories, workshops, libraries and administration.

The Max Planck Institute for Plant Breeding Research conducts basic research on plants and their development using a wide variety of methods, in particular molecular genetics, genomics, imaging processes, computational biology and biochemistry. Our goal is the deep and detailed understanding of fundamental mechanisms in plant biology that may then also be used to develop innovative strategies for plant breeding.

The Department of Comparative Development and Genetics at the Max Planck Institute for Plant Breeding Research (MPIPZ) is seeking a

Group Leader (m/f/d) in the area of Plant Development and Diversity.

The Department operates under the direction of Honorary Professor Dr. Miltos Tsiantis and investigates problems of plant development and diversity. The successful applicant will be expected to build an independent research group to study plant development and/or its natural variation and to collaborate on active research projects in the Department. Of particular interest are candidates that incorporate computational approaches in their research, and dry lab scientists are also welcome to apply. The successful candidate will participate in Graduate Programs and external funding bids, and core funding will be available.

We seek candidates with a PhD, who typically will have 2-5 years of postdoctoral experience, an excellent publication record, and who use creative approaches to investigate problems of plant development, diversity, and evolution. We are looking for a highly interactive scientist who is able to engage in successful collaborations with colleagues at different levels both within and beyond the Department, and who can participate in the training of younger scientists. Salary and benefits are according to the German TVöD Bund. This is a five-year position with possibilities for renewal. All contractual arrangements are subject to the German public service regulations for the duration of scientific training.

Interested candidates are invited to submit applications by August 31st 2025, as a single PDF document consisting of:

i. a two-page CV including the names and contact details of two academic referees

ii. a personal statement explaining their academic accomplishments, motivation for applying for this post, potential synergies with the Department (https://www.mpipz.mpg.de/226344/tsiantis-dpt) and their outlook on fostering a collegial, collaborative environment to support the training of early career scientists

iii. a publication list highlighting their 2-3 most relevant papers with a 150-word summary explaining the significance of each

iv. a two-page statement of research plans for the next five years

An appointment will only be made if a suitable candidate is identified.

The Max Planck Society strives to increase employment of severely disabled people. Applications from severely disabled people are expressly encouraged.

Furthermore, the Max Planck Society wants to increase the proportion of women in areas where they are underrepresented. Women are therefore expressly encouraged to apply.

The Little Pumpkins Parents' Association offers childcare for children under the age of 3 at the MPIPZ.

It is possible to apply for a low-cost Germany job ticket with a subsidy from the Institute. The institute also has a rental bike station run by the provider nextbike, as well as the possibility of using rental scooters from various providers.

Website: http://www.mpipz.mpg.de

Interested candidates, please upload your complete application documents, including your preferred starting date via our online-portal.

https://jobs.mpipz.mpg.de/jobposting/bbee34642a13b6978bb2bb0b5531a1c21a2d2ea60?ref=asm

SUMMARY

The Biology Department at Skidmore College invites applications for a tenure-track Assistant Professor position in Bioinformatics, beginning in Fall 2026.

DESCRIPTION

Qualified candidates will: 1) possess a Ph.D. in any sub-discipline of Biology; 2) have expertise in bioinformatics (e.g., functional genomics, metagenomics, transcriptomics, proteomics, and/or metabolomics), which will be a focal point of their teaching and scholarship; 3) have post-doctoral or similar training, with evidence of an active research program that has the potential to involve undergraduates; and 4) demonstrate their experience, training, and enthusiasm for teaching undergraduate-level courses at all levels of the curriculum. (https://www.skidmore.edu/biology/index.php).

The individual hired for this position will have a dedicated research laboratory within the Billie Tisch Center for Integrated Sciences (CIS), a modern, well-equipped facility designed to foster interdisciplinary connections among life science programs and the College. The CIS houses extraordinary shared facilities, including the Skidmore Microscopy Imaging Center (https://www.skidmore.edu/smic/index.php), the Skidmore Analytical Interdisciplinary Laboratory (https://www.skidmore.edu/sail/index.php), and a vivarium for housing vertebrate model organisms, all staffed by highly qualified personnel. Adjacent to the CIS is a newly constructed modular greenhouse. The hire may also benefit from Skidmore's North Woods (a 150-acre forested landscape abutting campus) and proximity to the terrestrial and aquatic ecosystems of the Hudson River Valley and Adirondack regions.

Skidmore College is a highly selective, nationally ranked liberal arts college in Saratoga Springs, New York, with a student population of ~2700 (8:1 student-faculty ratio). Skidmore is known for its faculty committed to the instruction and mentoring of undergraduates in a collaborative teaching and research environment.

The hire will receive generous start-up funds, a pre-tenure research leave, access to support for travel to conferences/workshops, and a 3-contact hour course release in the first year. The hire will be expected to teach 18 contact hours each year, with each lecture or lab section representing 3 contact hours. Teaching expectations include developing and delivering an intermediate-level Bioinformatics lecture and lab course, populated by students with diverse career interests (e.g., ecology, evolution, genetics, biomedicine, cell and molecular biology, microbiology, and animal/plant physiology). The hire will also contribute to delivering an introductory lecture course in Cell and Molecular Biology (BI 107), Organismal Biology (BI 108), or Biostatistics (BI 235); a first-year Scribner Seminar; and one or more upper-level specialized courses that will contribute to the Biology curriculum.

COMPENSATION

Salary: $78,000 - $85,000

HOW TO APPLY

Complete applications are due by midnight on September 1st, 2025 (Eastern Standard Time). Inquiries about the position may be sent to the department chair, Dr. Pat Hilleren (phillere[at]skidmore.edu). Applications that are either incomplete or submitted after the due date will not be considered.

Special Instructions for Applicant:

A complete application includes the following five documents submitted as PDFs: (1) a cover letter summarizing your enthusiasm and preparation for a tenure-track faculty position at an undergraduate institution, detailing how your training and expertise meet the qualifications described above; (2) a curriculum vitae; (3) a statement of teaching philosophy and goals that articulates how you will engage a diverse learning community; includes brief descriptions of new courses (including Bioinformatics) that you will develop; as well as a general description of the resources/infrastructure needed to support your teaching of Bioinformatics and other upper-level courses; (4) a research statement describing your research program that includes how it will involve undergraduates and the resources/infrastructure required to support your activities; and (5) the names, affiliations, and contact information of three professional references who will provide letters of support in a timely fashion (within 7 days) upon request.

Online application: https://eodq.fa.us6.oraclecloud.com/hcmUI/CandidateExperience/en/sites/CX/job/2743/?utm_medium=jobshare&utm_source=External+Job+Share

EEO STATEMENT

Skidmore College is committed to being an inclusive campus community and, as an Equal Opportunity Employer, does not discriminate in its hiring or employment practices on the basis of race, color, creed, religion, gender, age, national or ethnic origin, physical or mental disability, military or veteran status, marital status, sex, sexual orientation, gender identity or expression, genetic information, predisposition or carrier status, domestic violence victim status, familial status, dating violence, or stalking, or any other category protected by applicable federal, state or local laws.

Employment at Skidmore College is contingent upon an acceptable post-offer background check result.

CREATIVE THOUGHT MATTERS.

***Temporary contract | 24 months | Belvaux Are you passionate about research? So are we! Come and join us***

The Luxembourg Institute of Science and Technology (LIST) is a Research and Technology Organization (RTO) active in the fields of materials, environment and IT. By generating relevant scientific knowledge and converting knowledge into technologies, smart data and tools, LIST empowers citizens in their choices, public authorities in their decisions and businesses in their strategies.

Trees and particularly the conifers of northern hemisphere play crucial roles for the terrestrial carbon (C) cycle. However, a general understanding of fundamental C-fluxes between cells and tissues within plant organs is largely lacking. In an increasingly stressing environment, such science is needed for assessing the ability of different plants to maintain their cellular homeostasis.

In the framework of the interdisciplinary research project microC-flux (https://www.wsl.ch/en/projects/diel-c-fluxes-within-needles-from-conifer-trees), we use cutting edge technology to investigate the dynamics of freshly assimilated carbon and its transport from the assimilation sites in mesophyll of conifer needles, through the transfer tissues, to the phloem export sites and further, towards other tree organs. In collaboration with the Swiss Federal Institute for Forest, Snow and Landscape Research WSL, we combine pulse-chase tracer experiments with quantitative microscopical analysis and physics-based modelling to understand how conifers solve the challenge of solute transport against the flow of water through the needle, and what anatomical and functional features are key for resistance to drought.

Do you want to know more about LIST? Check our website: https://www.list.lu

How will you contribute?

Building on the extensive experimental data gathered and processed by a doctoral candidate in the project, you will extend the existing open-source Model of Explicit Cross-section Hydraulic Anatomy (MECHA) to simulate water and solute transport in pine needles and explicitly represent starch pool dynamics in the 1) mesophyll, 2) the inner tissues within the vascular bundle and 3) the endodermis as the tissue at the interface between the vascular bundle and mesophyll. In its original version, MECHA simulates water and solute transport as a 3-dimensional process, differentiating between apoplastic and symplastic transport. Since MECHA was originally developed to simulate water and solute transport in roots, part of this task will be to introduce gaseous transport of water and CO2, and transitory starch pools. Model development will be performed in collaboration with the developers of MECHA at UC Louvain and plant ecophysiologists and anatomists at WSL, necessitating episodic visits to Louvain-la-Neuve and Switzerland. You will share the model code in the public domain and publish scientific papers in reputed journals on the insights gained through the model-assisted hypothesis testing performed in the microC-flux project.

Is Your profile described below? Are you our future colleague? Apply now!

Education:
  • You hold a PhD in Biology, Environmental Science, or a related discipline
Experience and skills
  • You have a strong interest for plants and Physics. A background in plant ecophysiology would be ideal, but is not required.
  • You have programming experience, knowledge of Python and Git is a plus.
  • You have a proven ability to write high-quality scientific papers.
  • You like working in a team, explaining and presenting research ideas and results.
Language skills:
  • Very good level of written and spoken English.
Your LIST benefits:
  • An organization with a passion for impact and strong RDI partnerships in Luxembourg and Europe that works on responsible and independent research projects
  • Sustainable by design, empowering our belief that we play an essential role in paving the way to a green society
  • Innovative infrastructures and exceptional labs occupying more than 5,000 square metres, including innovations in all that we do
  • An environment encouraging curiosity, innovation and entrepreneurship in all areas
  • Personalized learning programme to foster our staff's soft and technical skills
  • Multicultural and international work environment with more than 50 nationalities represented in our workforce
  • Diverse and inclusive work environment empowering our people to fulfil their personal and professional ambitions
  • Gender-friendly environment with multiple actions to attract, develop and retain women in science
  • 32 days' paid annual leave, 11 public holidays, 13-month salary, statutory health insurance
  • Flexible working hours, home working policy and access to lunch vouchers
Apply online:

We seek candidates with a strong potential to excel in a collaborative and multidisciplinary environment, and use their skills for the benefit of society.

Your application must include:
  • A motivation letter oriented towards the position and detailing your experience
  • A scientific CV with contact details
  • List of publications and patents (if applicable)
  • Contact details of 2 references
Please apply ONLINE formally through the HR system https://vonq.io/4kbPjqS. Applications by email will not be considered.

Application procedure and conditions:

We kindly request applicants to provide their nationality for statistical purposes only, as part of our commitment to promoting diversity and ensuring equal opportunities in our workforce. This information will be kept confidential and will not be used for any discriminatory purposes.

LIST is dedicated to maintaining an inclusive work environment and is an equal opportunity employer. We are committed to attracting, hiring, and retaining a diverse workforce. All applicants will be considered for employment without discrimination based on national origin, race, colour, gender, sexual orientation, gender identity, marital status, religion, age, or disability.

Applications will be continuously reviewed until the position is filled. An assessment committee will thoroughly evaluate applications, adhering to guidelines designed to ensure equal opportunities. The primary criteria for selection will be the alignment of the applicant's existing skills and expertise with the requirements mentioned above.

Please note that by applying you consent to share your application outside of LIST with Pierre Vollenweider (WSL, Switzerland), and Valentin Couvreur (UC Louvain).

Candidates shall be available for starting their position in summer/autumn 2025. The application deadline is on 15 June, but applications will be reviewed continuously.

BACKGROUND

Join the South Australian Genomics Centre (SAGC) – Bioinformatician Opportunity. Full-Time, 2-Year Contract

The South Australian Genomics Centre (SAGC) is a national, multi-institutional facility supported by Bioplatforms Australia through the Australian Government's National Collaborative Research Infrastructure Strategy (NCRIS) initiative. Based in Adelaide, we bring together a team of ~16 genomics and bioinformatics specialists working across agriculture, healthcare, ecology and more. We're committed to delivering innovative, high-impact genomics solutions.

RESPONSIBILITIES

We're looking for an entry-level postdoctoral researcher or experienced MSc-level bioinformatician to join our collaborative team.

In this role, you'll:
  • Conduct end-to-end bioinformatics analyses on a wide range of projects
  • Develop reproducible, standardised workflows and pipelines
  • Collaborate on research publications and grant applications
  • Engage with diverse data from cutting-edge genomics technologies
  • Build deep expertise in a specialist area of bioinformatics
You'll thrive in a fast-paced, multi-project environment with the support and mentorship to grow professionally.

Key Responsibilities:
  • Provide bioinformatics support across client projects
  • Build and maintain analysis pipelines using best practices
  • Draft scientific reports and contribute to publications
  • Work closely with genomics staff and researchers from varied disciplines

REQUIREMENTS

Essential:
  • MSc, PhD or equivalent in bioinformatics, computer science, statistics, physics, or related field
  • Experience with scripting languages (e.g., Python, R, bash, Perl)
  • Familiar with version control, containerisation (Docker/Singularity), and workflow systems (e.g., Nextflow)
  • Excellent organisation, time management, and communication skills
  • Able to manage multiple projects and work both independently and in teams
  • Prior experience with HPC environments
Desirable:
  • Expertise in one or more of the following: RNA-seq, genome assembly, metagenomics, multi-omics, or data visualisation
  • Experience in client-focused roles
  • Familiarity with cloud computing, Linux admin, or additional programming languages (e.g., C++, Java, Rust)
  • Background in biomedical, agricultural, or environmental research

LOCALE

Adelaide, South Australia

COMPENSATION

What We Offer:
  • Competitive salary with salary packaging up to $15,900 through Maxxia
  • Flexible work arrangements to support work life balance
  • Exposure to diverse research fields and technologies
  • Career development support, including training, publishing, and grant opportunities
  • A collaborative, values-driven work environment
  • A chance to contribute to real-world impact through genomics research
Our Culture and Values:

Everything we do is underpinned by our core values and our institute is dedicated to grow a culture that pursues, enables and demands research excellence. We are proud of the work we do and work hard as a team to make a positive difference to the community. Our values of excellence, innovation, courage, integrity and teamwork are what help us achieve our goals.

If these are also your values and goals, apply today.

HOW TO APPLY

If you are passionate about advancing genomics research and thrive in a collaborative environment, we want to hear from you.

For a confidential discussion, please contact Sen Wang, SA Genomics Centre Manager at Sen.Wang[at]sahmri.com

Please visit the SAHMRI website for a copy of the position description at https://sahmri.org.au/careers-and-study/working-at-sahmri/vacancies

DEADLINE

Applications close Sunday 22nd June 2025.

Aboriginal and Torres Strait Islander people are strongly encouraged to apply.

Dear All,

The University of Calgary is seeking a Postdoctoral Associate in the field of Bioinformatics. This position offers the chance to work on cutting-edge research projects at the intersection of genomics, computational biology, and data science.

SUMMARY:

Area: Genomics of Clinical and Environmental Fungi and Bacteria
Duration: One-year position (subject to renewal)
Start Date: ASAP
Salary: $60,000-65,000 depending on experience/year plus benefits

The Cumming School of Medicine and Faculty of Science at the University of Calgary are accepting applications for a Postdoctoral Scholar in Bioinformatics and its application to Wastewater-Based Surveillance (WBS) of antimicrobial resistance and emerging pathogens.

DESCRIPTION:

The postdoc will be part of an interdisciplinary research team that uses wastewater to track the dynamics of infectious agents. We have developed an integrated surveillance network monitoring 43 municipalities, as well as several sentinel surveillance hubs including a large number of tertiary care hospitals and populations of special interest from which we collect samples 1-3x per week. Wastewater data can be compared with population-level data and hospital-specific data drawing from a single provincial health provider, and the potential of this unique network is exceptional. To date we have amassed >2000 samples that have been processed as raw wastewater and culture enriched raw wastewater (for specific pathogens). A parallel agriculture and agri-food network is being developed which will be further leveraged. The postdoc will work directly with a transdisciplinary team of clinicians and researchers at the University of Calgary (Cumming School of Medicine and Faculties of Science, Engineering, and Veterinary Medicine, and Advancing Canadian Water Assets (ACWA)) and their collaborators including those at the Universities of Alberta, Athabasca and Lethbridge. The Postdoc will also have the opportunity to collaborate with public health, pharmacy, infection control, and antimicrobial stewardship experts at Alberta Health Services.

The successful applicant will join a productive transdisciplinary team with supporting research funding from NSERC, CIHR, Genome Alberta, and Alberta Health. Working with the Primary Investigators Michael Parkins and John Conly (Cumming School of Medicine, Departments of Medicine and Microbiology, Immunology & Infectious Diseases) and Casey Hubert (UCalgary Research Chair, Faculty of Science). The Postdoc will work as part of a large team that includes several HQP staff and trainees including those in graduate, undergraduate and post graduate training programs. There will be abundant opportunities for collaboration with others interested in bioinformatics and mentorship of junior trainees.

The successful candidate will be based at the University of Calgary and utilize archived (>2000 samples to date) and newly collected wastewater samples for bioinformatics and molecular analyses for the detection of bacteria, fungal and viral pathogens and antimicrobial resistance genes. The candidate will be exposed to multiple teams with complementary skillsets working across a range of labs and campuses. This position will utilize our existing research capacity in field sampling to follow with molecular detection using nucleic acid sequencing (amplicon and/or shotgun) based approaches. Applying or developing bioinformatics analysis pipelines is an essential part of this work. This postdoc will play a key role in our team¿s efforts to disseminate information, and there will be abundant opportunities to contribute to peer-reviewed publications and presentations. Accordingly, contributing to the preparation of manuscripts will be a high-priority objective for this position. Additional responsibilities will include participating in and supporting the team described above and some supervision of junior colleagues.

QUALIFICATIONS:
  • PhD in bioinformatics, molecular biology, microbiology, or a related field
  • Strong experience in (meta)genomics or bioinformatics, preferably antimicrobial resistance or wastewater environment
  • Experience in scripting in Python and/or R, use of software for genomic or metagenomic analysis, and data visualization
  • Experience with biostatistical approaches is desirable
  • Understanding of analytical methods, particularly in molecular microbiology
  • Must be able to work in a team environment and interact with a diverse range of colleagues and collaborators
  • Strong communication skills as well as good organizational, time management, and problem-solving skills
  • Ability to work independently and resourcefully, while interacting effectively with internal and external stakeholders at all levels of the organization
  • Able to work within a collaborative setting with others to set clear priorities while managing multiple timelines and objectives
  • Evidence of good research productivity
  • Strong academic writing potential
HOW TO APPLY:

Candidates applications should include the following:
  • A brief cover letter outlining interest in this project, detailing qualifications and/or related experience as well as career goals
  • A detailed resumé
  • Name and contact information of three references
  • An example of your peer-reviewed publications.
  • The terms and conditions of employment are covered under the UCalgary and PDAC Collective Agreement. To find out more about postdoctoral scholar program at the University of Calgary visit our Postdocs website.
For full details and application instructions, please visit: https://careers.ucalgary.ca/jobs/15939098-postdoctoral-scholar-in-bioinformatics

We welcome highly motivated candidates with a strong background in bioinformatics, genomics, or related disciplines. Join a dynamic and collaborative research environment in beautiful Calgary, Alberta!

To learn more about postdoctoral scholar opportunities at the University of Calgary, view our Postdoc Careers website.

ABOUT THE UNIVERSITY OF CALGARY:

UCalgary is Canada's entrepreneurial university, located in Canada's most enterprising city. It is a top research university and one of the highest-ranked universities of its age. Founded in 1966, its 36,000 students experience an innovative learning environment, made rich by research, hands-on experiences and entrepreneurial thinking. It is Canada's leader in the creation of start-ups. Start something today at the University of Calgary. For more information, visit ucalgary.ca.

ABOUT CALGARY, ALBERTA:

Calgary is one of the world's cleanest cities and has been named one of the world's most livable cities for years. Calgary is a city of leaders' in business, community, philanthropy and volunteerism. Calgarians benefit from the strongest economy in the nation and enjoy more days of sunshine per year than any other major Canadian city. Calgary is less than an hour's drive from the Rocky Mountains and boasts the most extensive urban pathway and bikeway network in North America.

The University of Calgary has launched an institution-wide Indigenous Strategy committing to creating a rich, vibrant, and culturally competent campus that welcomes and supports Indigenous Peoples, encourages Indigenous community partnerships, is inclusive of Indigenous perspectives in all that we do.

POLICIES:

As an equitable and inclusive employer, the University of Calgary recognizes that a diverse staff/faculty benefits and enriches the work, learning and research experiences of the entire campus and greater community. We are committed to removing barriers that have been historically encountered by some people in our society. We strive to recruit individuals who will further enhance our diversity and will support their academic and professional success while they are here. In particular, we encourage members of the designated groups (women, Indigenous peoples, persons with disabilities, members of visible/racialized minorities, and diverse sexual orientation and gender identities) to apply. To ensure a fair and equitable assessment, we offer accommodation at any stage during the recruitment process to applicants with disabilities. Questions regarding [diversity] EDI at UCalgary can be sent to the Office of Institutional Commitments (equity[at]ucalgary.ca) and requests for accommodations can be sent to Human Resources (hrhire[at]ucalgary.ca).

#Bioinformatics #Postdoc #Genomics #ComputationalBiology #UCalgary #PostdoctoralFellow

BACKGROUND

The CHUM is a world-renowned academic medical center recognized for its expertise in clinical research, specialized care, and medical innovation. A leader in precision health, the CHUM is pioneering personalized care based on patients' genetic, environmental, and biological characteristics. This strategic focus enables the CHUM to transform research into concrete solutions that enhance the quality of care.

At the forefront of technical and clinical advancements, the Molecular Diagnostics Laboratory actively contributes to the development of the Quebec Molecular Diagnostics Network (RQDM) and is responsible for the majority of specialized and supra-regional molecular analyses in the province.

As part of our ongoing expansion, we are seeking a Clinical Specialist in Medical Biology, with a focus on molecular diagnostics, particularly next-generation sequencing (NGS). Clinical experience in oncology and/or genetics will be considered a strong asset.

RESPONSIBILITIES

Under the medical direction of the Molecular Biology Laboratory Director and the authority of the Service Chief, the Clinical Specialist in Medical Biology is responsible for interpreting molecular biology test results (with an emphasis on NGS), drafting clinical reports, developing new techniques and panels, and supporting clinical laboratory operations. The specialist acts as an expert advisor to physicians and laboratory professionals, ensures the quality of molecular analyses, and contributes to the development of technical competencies within the team.

The specialist also contributes to the preparation of various documents, including clinical reports, validation and verification studies, and standard operating procedures (SOPs).
  • Supervise the execution of molecular biology analyses in the laboratory
  • Review and interpret molecular biology test results; write detailed clinical reports
  • Develop new testing methods and coordinate validation studies
  • Design, monitor, and maintain internal and external quality control programs
  • Create and oversee standardization initiatives for lab techniques, processes, and SOPs
  • Participate in the training of medical residents, graduate students, medical technologists, and other professionals
  • Perform other duties as assigned by the Service Chief or Medical Director

REQUIREMENTS

  • Ph.D. in Molecular Biology or a related discipline
  • Minimum of two years of postdoctoral training in a molecular biology – related field
  • Expertise in molecular hematology, molecular oncology, or molecular genetics is highly desirable (e.g., solid tumors, hereditary cancers, hematologic malignancies)
  • Clinical experience in molecular diagnostics and in the interpretation of germline or somatic variants, following current clinical guidelines, is considered a strong asset
  • Hands-on experience with PCR, real-time PCR, Sanger sequencing, and next-generation sequencing (NGS) technologies

PREFERENCES

Proficiency in French language is required.

COMPENSATION

Up to $ 120 000 CAD

HOW TO APPLY

Apply online: https://emplois.chumontreal.qc.ca/fr_CA/annonce/3461787-specialiste-clinique-en-biologie-medicale-laboratoire-de-biologie-moleculaire-h2x-1r6-montreal

I am looking for a PhD student in Computer Science with experience in Machine Learning (ML) to collaborate on a research project focused on identifying Oral Potentially Malignant Diseases (OPMD) using medical imaging. This is a paid opportunity (compensation in the range of a few thousand dollars) and will be conducted in partnership with Albany Medical Center in Albany, NY.

PROJECT OVERVIEW

The goal is to assess how well ML models can identify OPMD from a curated database of medical images. I have already compiled a dataset and need an ML expert to help with model selection, training, and evaluation. This project could lead to co-authorship on a research paper and further opportunities in medical AI.

WHO SHOULD APPLY

  • PhD students in Computer Science, AI, or a related field with strong ML expertise.
  • Experience with medical imaging, deep learning (CNNs, transformers), and classification models is a plus.
  • Interest in interdisciplinary research in medicine and AI.

HOW TO APPLY

If you're interested, please email me at mahmoom4[at]amc.edu with your CV and a brief summary of your ML experience. Let's discuss how we can collaborate!

BACKGROUND

The Penn State College of Medicine, Department of Molecular and Precision Medicine, in Hershey, PA, is seeking a Researcher to join the Georgakopoulos-Soares lab. The lab focuses on developing and implementing new computational and artificial intelligence methods in genomics and molecular biology. Current projects include the identification of genetic biomarkers for the diagnosis, monitoring and treatment of human diseases and cancer, the characterization of non-B DNA sequences across the tree of life, the development of bioinformatics tools and databases, and the study of regulatory grammar.

REQUIREMENTS

We are seeking a qualified researcher with expertise in computational biology, software engineering and artificial intelligence. This position requires a master's degree or its equivalent, or to be enrolled as an active candidate for a terminal degree in a related field. The candidate should have a strong publication record and be involved in ongoing research projects, have experience with collaborative scientific project execution, as well as a commitment to mentoring and a desire to work in an interactive, diverse, and inclusive research group. Applicants with experience in high performance computing and artificial intelligence are strongly encouraged to apply.

KEY RESPONSIBILITIES

  • Collaborate with researchers to analyze and develop computational and machine learning methods and pipelines, evaluating and selecting appropriate approaches for omics research problems.
  • Apply mathematical theories and advanced artificial intelligence techniques to answer research questions in bioinformatics and genomics.
  • Optimize and extend algorithms, analysis pipelines, and software to enhance efficiency, scalability, and effectiveness in research computing.
  • Perform advanced statistical analyses and create high-quality visualizations of research findings.
  • Work independently while defining objectives and ensuring quality and timeliness of research projects.
  • Author or co-author research papers and present results at scientific meetings and conferences.
  • Draft grant proposals based on the candidate's and the lab's research in collaboration with the Principal Investigator.
  • Supervise and mentor junior staff, students, or other research personnel.

HOW TO APPLY

Interested candidates should upload a cover letter, CV, and 4-5 relevant publications. In addition, applicants will be asked for the names and contact information of up to three professional references during the interview process.

This is a limited-term non-tenure line position funded for one year from date of hire, with possibility of refunding.

Employment will require successful completion of background check(s) in accordance with university polices.

The Pennsylvania State University is committed to and accountable for advancing diversity, equity, and inclusion in all of its forms. We embrace individual uniqueness, foster a culture of inclusive excellence that supports both broad and specific diversity initiatives, leverage the educational and institutional benefits of diversity, and engage all individuals to help them thrive. We value inclusive excellence as a core strength and an essential element of our public service mission.

Apply online at https://apptrkr.com/6058214

POLICIES

CAMPUS SECURITY CRIME STATISTICS: For more about safety at Penn State, and to review the Annual Security Report which contains information about crime statistics and other safety and security matters, please go to http://www.police.psu.edu/clery/, which will also provide you with detail on how to request a hard copy of the Annual Security Report.

Penn State is an equal opportunity, affirmative action employer, and is committed to providing employment opportunities to all qualified applicants without regard to race, color, religion, age, sex, sexual orientation, gender identity, national origin, disability or protected veteran status.

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The Computational Biology Core within the Institute for Systems Genomics provides essential consulting, data analysis, and data interpretation services to advance research efforts. This role involves collaborating with faculty, post-doctoral fellows, and research staff on a wide array of biological topics, including high-throughput sequencing, analytic approaches, and workflow management. The analyst plays a key role in providing background on current techniques, managing multiple overlapping data analysis projects, providing general HPC user support, and providing regular workshop-based training to the broader community. The analyst will join a small team that supports research at all UConn campuses.

DUTIES & RESPONSIBILITIES

  • Support of the HPC resources
  • Support users through installing open-source scientific software and troubleshooting user code
  • Manage and update shared databases
  • Develop curriculum and lead training workshops
  • Conduct analysis of high throughput genomic data for the research community
  • Triage requests received via Slack, and the e-mail-based help desk

MINIMUM QUALIFICATIONS

  • M.A./M.S. in computational or biological sciences
  • Experience with analyzing high-throughput sequence data
  • Proficiency with Linux
  • Comfort interacting with an HPC system
  • Strong presentation and communication skills
  • Positive attitude and ability to work as part of a team (multi-tasking extraordinaire)

PREFERRED QUALIFICATIONS

  • Comfort with R and/or Python programming
  • Proficiency with open-source software installation

APPOINTMENT TERMS

This temporary special payroll position requires 40 hours per week, with an hourly rate of $34.00. This short-term role (6 months) – the goal is to transition this position to a long-term staff scientist position for the right candidate.

The position can be fully on-site or hybrid (candidate must reside in the state of CT). This position does not offer sponsorship benefits.

HOW TO APPLY

To apply, please email a resume and cover letter detailing your qualifications to karelyn.lambert[at]gmail.com, with the subject line "Research Technician Application." Screening will begin immediately.

BACKGROUND

Institut Imagine is a leading European research center dedicated to better understanding and treating genetic diseases. Imagine fosters a multidisciplinary and collaborative environment among 28 dynamic research groups by uniquely integrating basic and translational science.

The Imagine Institute is seeking for applications from outstanding Junior Group Leaders in the fields of RNA biology and Epigenomics with a strong interest in biological systems and genetic diseases. This position comes with an internationally competitive start-up package.

POTENTIAL AREAS OF FOCUS INCLUDE

  • Epigenetics & Epitranscriptomics: DNA methylation, regulatory regions, and non-coding elements
  • RNA Biology
  • RNA Therapeutics & Diagnostics
  • Gene Editing Technologies: Use CRISPR & ADAR for precise DNA, RNA, and epigenome editing
  • mRNA Vaccine & Therapy Development

DESIRED QUALIFICATIONS

  • Ph.D. and postdoctoral experience with a strong focus on RNA biology & regulation and/or epigenomics.
  • A keen interest in understanding the molecular mechanisms underlying genetic diseases through the lens of RNA biology& regulation and/or epigenomic regulation.

HOW TO APPLY

Applications should be submitted to teamcallapplication[at]institutimagine.org and must include:
  • A full CV (including a detailed list of publications)
  • Past and current research interests (2 pages)
  • Future research proposal (3 pages)
  • Recommendation letters (3).

DEADLINE

Applications must be received by February 28th 2025.

Pre-selected candidates will be notified from March 8th 2025 for auditions by the Scientific Advisory Board.

Integration of the new group can be effective from September onwards.

BACKGROUND

Institut Imagine is a leading European research center dedicated to better understanding and treating genetic diseases. Imagine fosters a multidisciplinary and collaborative environment among 28 dynamic research groups by uniquely integrating basic and translational science.

Institut Imagine is seeking an outstanding Systems and Computational Biology expert to join our team as a Junior Group Leader. This position comes with an internationally competitive start-up package.

KEY COMPETENCIES

  • Established expertise in system biology, including skills in causal inference and statistical predictions and/or demonstrated experience developing mechanistic or dynamic models that mimic biological systems, as demonstrated by peer-reviewed publications
  • Ability to lead a system biology program, as evidenced by publications and grants
  • Ability to collaborate with basic and clinical research teams to develop multidisciplinary project

PREFERRED QUALIFICATIONS

  • Ph.D. and postdoctoral experience in a quantitative field such as Systems, Synthetic, or Computational Biology; Bioinformatics; Data Science; Statistics; Applied Mathematics; or a related discipline
  • Experience with health applications of computational modeling and AI
  • Experience with modern machine-learning libraries and tools, especially in bioinformatics
  • Experience with cellular/molecular biophysics

HOW TO APPLY

Applications should be submitted to teamcallapplication[at]institutimagine.org and must include:
  • A full CV (including a detailed list of publications)
  • Past and current research interests (2 pages)
  • Future research proposal (3 pages)
  • Recommendation letters (3).

DEADLINE

Applications must be received by February 28th 2025.

Pre-selected candidates will be notified from March 8th 2025 for auditions by the Scientific Advisory Board.

Integration of the new group can be effective from September onwards.

DESCRIPTION

Located in the heart of Paris on the Necker – Enfants Malades Hospital campus, Institut Imagine and Institut Necker Enfants Malades (INEM) are equipped with cutting-edge core facilities and foster a collaborative environment, uniquely positioning them to bridge research and patient care.

Institut Imagine and INEM seek outstanding Artificial Intelligence (AI) experts to join their teams as tenure-track Junior Group Leaders. These positions focus on applying AI to Biomedical Research, with a strong interest in Genetic Medicine, and offer internationally competitive start-up packages.

Successful candidates will develop an ambitious research program in collaboration with Institut Imagine, INEM, and the PR[AI]RIE AI community, pioneering novel AI approaches to understand, diagnose, and treat Mendelian and complex diseases.

REQUIREMENTS

Candidates should have a strong AI development background in at least one of the following areas:
  • Imaging Analysis and Computer Vision
  • Multimodal Data Integration
  • Therapeutic Target Identification using machine learning and AI approaches
  • Disease Pathogenesis Modeling by constructing AI-enhanced models or simulations
  • Diagnosis and Treatment Response Modeling
Minimum Job Requirements:
  • Ph.D. in Computer Science, Mathematics, Statistics, Data Science, Computational Biology, or a related field.
  • Expertise in the theoretical underpinnings, implementation, and biomedical applications of AI methods, as evidenced by peer-reviewed publications.

HOW TO APPLY

Applications should be submitted to teamcallapplication[at]institutimagine.org and must include:
  • A full CV (including a detailed list of publications)
  • Past and current research interests (2 pages)
  • Future research proposal (3 pages)
  • Recommendation letters (3).

DEADLINE

Applications must be received by February 28th 2025.

Pre-selected candidates will be notified from March 8th 2025 for auditions by the Scientific Advisory Board.

Integration of the new group can be effective from September onwards.
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