[Biococoa-dev] Factories

Alexander Griekspoor mek at mekentosj.com
Tue Aug 31 18:00:06 EDT 2004


I've added that a few hours ago to the demo_app, and send the changed 
files to Koen to be added to cvs, unfortunately my email is hold of for 
the moderator's approval as I attached a zip file with the source.
Alex


Op 31-aug-04 om 23:49 heeft John Timmer het volgende geschreven:

>>
>> On Aug 30, 2004, at 2:31 PM, John Timmer wrote:
>>
>>> It did 1 frame of my 11KB test sequence in about 0.2 of a second,
>>
>>
>>
>> How did you measure that?
>>
>
> I should admit that I've tested it a bunch of times now, and the 
> results are
> very variable depending on the burden on my system.  Best results tend 
> to be
> less than 0.15, but if the machine's busy, it can easily take over 0.3 
> of a
> second.
>
> Regardless, I use NSDate's as in the following code snippet:
>
> NSDate *now = [NSDate date];
> if ( [[theInput string] length] == 0)
>         return;
>
> BCSequenceDNA *theSequence = [BCSequenceDNA DNASequenceWithString: 
> [theInput
> string] skippingNonBases: YES];
>
> NSArray *translation = [BCUtilDNATranslator translationOfSequence:
> theSequence inRange: NSMakeRange( 0, [theSequence length] ) 
> usingDictionary:
> @"universal genetic code"];
>
> NSLog ( @"%f", [now timeIntervalSinceNow] );
>
>
> _______________________________________________
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>
>
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>
*********************************************************
                     ** Alexander Griekspoor **
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               The Netherlands Cancer Institute
               Department of Tumorbiology (H4)
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                   E-mail: a.griekspoor at nki.nl
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              http://www.mekentosj.com/irnai

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