[Biococoa-dev] new to the list

[Todd Harris]

Hi John - 

Good to be on board!

You can check out the GMOD adaptor from CPAN.

Bio::GMOD

It hasn't propagated to all the mirrors yet.  I'm still laying in
infrastructure and working on data schema acstraction layer right now.  That
will go in for release 0.02 :)

Todd

> On 2/22/05 9:05 PM, John Timmer wrote:

> Welcome!
> 
> It looks like we've got a few professionals on board now - it'll be good to
> have your perspective, and hope I don't come across as too clueless when you
> go through the archive.
> 
> Do you have some links to point us to so that we can check into the database
> adapter?  I'd be interested in looking it over.
> 
> Cheers,
> 
> John
> 
> 
>> Hi all - 
>> 
>> I've been lurking on the list for a few weeks but have never introduced
>> myself properly.
>> 
>> I'm a scientific programmer -- formerly a postdoc -- in Lincoln Stein's lab
>> at Cold Spring Harbor Laboratory.  I'm a biologist by training although I
>> write code full time now.
>> 
>> By way of background, I primarily work in Perl as the central developer of
>> WormBase, and on projects like BioPerl and the Generic Model Organism
>> Database project.  I just today released what I hope will become a unified
>> API for biological databases, insulating end users from model changes and
>> data mining minutae.  I also do basic research in comparative genomics. I'm
>> currently working on algorithms for multiple whole genome alignment and
>> visualization.
>> 
>> Anyway, I just wanted to delurk and say hello.  I'm reading messages now as
>> I get up to speed with the status of the project.  It's clearly a dynamic
>> and dedicated group.  I hope to be able to contribute wherever needed.
>> 
>> Todd
> 
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