[Biococoa-dev] biococoa svn and everything

Davide Cittaro davide.cittaro at ifom-ieo-campus.it
Wed Sep 12 03:52:20 EDT 2007

Hi both!
On Sep 12, 2007, at 2:39 AM, Koen van der Drift wrote:
> Welcome to the BioCocoa team! It's good to see some new blood in  
> the project, and to know that there is still interest in the  
> framework.

Is the BioCocoa project still "alive"? Don't get me wrong, I've  
received the last mail from the mailing list in... may 2007! How many  
people are involved?

> Not sure if you already found this info on our wiki page, but here  
> you can read about how to commit files to the project:
> http://bioinformatics.org/biococoa/wiki/pmwiki.php?n=Main.AddingFiles

I'm going to read! Thanks

>> As for testing, there is a target in the Xcode project called  
>> "Test - BCFoundation" which tests some of the classes, it is not a  
>> comprehensive test suite but it does check a number of things.  If  
>> you build that target, it automatically runs the tests; you can  
>> see the output of the tests in the Build Results windows,  
>> specifically the Build Transcripts view in the middle section.  I  
>> don't believe there are any BCSequenceReader tests yet, maybe you  
>> would like to donate the first one with a simple test for the  
>> macvector format?

I have ony two demos in Xcode targets. They both work, I can import  
MacVector protein and nucleotide sequences.
Give me time to implement "features&annotations parsing" then I can  
think about a real-world test. Oh, consider that I have less than 30  
minutes a day to dedicate to BioCocoa :-)


Davide Cittaro
HPC and Bioinformatics Systems @ Informatics Core

IFOM - Istituto FIRC di Oncologia Molecolare
via adamello, 16
20139 Milano

tel.: +39(02)574303007
e-mail: davide.cittaro at ifom-ieo-campus.it

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