[Biodevelopers] Solution to use TagIdent in batch

Bruno Miguel brunomiguel at netcabo.pt
Tue Oct 29 17:02:16 EST 2002

On 29 Oct 2002 at 17:48, Jean-Etienne Poirrier wrote...

> I thought I can write it by myself and/or modify the TagIdent Perl script 
> (http://www.expasy.org/cgi-bin/tagident0.pl). But I don't know if TagIdent is an
> open source / free software. And, if it is, I cannot obtain the source code.
> Did someone already have such problem or know the solution? I look at 
> Google and BioPerl but I wasn't able to find anything.

You can either setup a php to script to get a .txt with your data (you define the format) 
and that queries the website for all the protein's information that are on the .txt and 
assembles it all to deliver you the results of all of those, or do a perl script.

That's a perl script run on the server, and somehow, I don't know if it would run ok if you 
tried it on your machine. I don't think the code is available, but I may be wrong.

"Linux is for Microsoft haters. BSD is for Unix lovers."
(Ruben van Staveren)

Bruno Miguel Afonso, Biological Eng. student.
brunomiguel at dequim dot ist dot utl dot pt
D.E.Q. @ I.S.T. - Portugal

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