[ghemical-devel] Fullerene calculations
Ulisses Leitao
ualeitao at yahoo.com
Wed Oct 22 17:38:36 EDT 2008
Dear Tommi,
now a scientific issue.
I used ghemical in order to optimize the fullerene chemical structure,
and found an interesting result.
The pdb file I had iniciate the calculations with had an
assimetrical hexagon, alternate with 1.45 nm and 1.37 nm long bonds.
The structure is basically some pentagons surrounded by hexagons,
making a carbon ball. The shorter bound distance was the frontier
of two pentagons.
The Energy calculation with ghemical gave in this case 3,084,7 kJ/mol.
After the optimization procedure with ghemical we found an energy of
1970,8 kJ/mol, with both side lengths approximately equals to 1.40 nm.
The question is: How precise is the ghemical in doing the geometry optimization?
What is the calculation method used?
Thanks a lot,
Ulisses
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://www.bioinformatics.org/pipermail/ghemical-devel/attachments/20081022/0a9ad624/attachment.html>
More information about the ghemical-devel
mailing list