[Owl-devel] Uniprot in a relational db

Jose M. Duarte jose.m.duarte at gmail.com
Wed Mar 17 09:37:14 EDT 2010

Not exactly belonging to this list, but I thought it was an easy way to
reach all of you together :-)

I am after having a local copy of the Uniprot Knowledge Base in relational
db format. I remember that Dan had something like this running locally

The data seems to be available here:


in a nice XML format, plus the schema is also available. So really
converting it into a database should be pretty straight forward.

Somebody knows of tools to do this?


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://www.bioinformatics.org/pipermail/owl-devel/attachments/20100317/6612b9b2/attachment.html>

More information about the Owl-devel mailing list