[Owl-devel] Uniprot in a relational db

Jose M. Duarte jose.m.duarte at gmail.com
Wed Mar 17 09:48:53 EDT 2010

Ok adding something to that I just found that they provide the data in RDF


Now, I don't know much about RDF but that seems to be almost the solution.
There must be standard tools out there to go from RDF to relational, aren't


On 17 March 2010 14:37, Jose M. Duarte <jose.m.duarte at gmail.com> wrote:

> Not exactly belonging to this list, but I thought it was an easy way to
> reach all of you together :-)
> I am after having a local copy of the Uniprot Knowledge Base in relational
> db format. I remember that Dan had something like this running locally
> before.
> The data seems to be available here:
> http://www.uniprot.org/downloads
> in a nice XML format, plus the schema is also available. So really
> converting it into a database should be pretty straight forward.
> Somebody knows of tools to do this?
> Cheers
> Jose
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