[Pdbwiki-devel] Move of upload pipeline

[Jose M. Duarte]

bifx.org


On 21 December 2010 18:04, Henning Stehr <stehr at molgen.mpg.de> wrote:

> Thanks Jose!
>
> Did you check in to the SVN on bifx.org or still on talyn?
>
> Have a good holiday!
>
> Henning
>
> On Tue, Dec 21, 2010 at 5:58 PM, Jose M. Duarte <jose.m.duarte at gmail.com>
> wrote:
> > Hi guys
> >
> > So I've tried for the first time the upload pipeline from bio.cc. I
> > basically only needed changing a few hard coded paths and the table names
> to
> > capitals.
> >
> > I've run it testing against pdbwiki.molgen.mpg.de (still up) and it
> worked.
> > The thing is that the the pdbwiki.molgen was more up to date than the
> pdbase
> > in bio.cc so it only needed to remove entries, so it's not a full test
> yet
> > (and it's still running now). But it's a start at least. By the way I've
> > modified the paths and all that in the repo so if we svn update at the
> mpimg
> > site it will overwrite the files with wrong paths and all that.
> >
> > For the moment we at least have things more or less set-up so that we can
> > start running it from bio.cc regularly soon. The cronjob at mpimg is
> still
> > on anyway.
> >
> > For info pipeline files are in /BiO/Store/PDBWiki/ with more or less the
> > same layout as before.
> >
> > That's it for now, I'm off home tomorrow. Hope you guys enjoy the
> holidays!
> > (I'll be reading email but less regularly)
> >
> > Jose
> >
> >
> > _______________________________________________
> > Pdbwiki-devel mailing list
> > Pdbwiki-devel at bioinformatics.org
> > http://www.bioinformatics.org/mailman/listinfo/pdbwiki-devel
> > http://www.pdbwiki.org
> >
> >
>
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