[Proteopedia] Jmol upgraded to 12.2

Cox, Arthur G. acox at southuniversity.edu
Wed Mar 28 06:44:32 EDT 2012

Thanks Jaime:

I appreciate you doing this, and will be using the new features.


Arthur G. Cox, PhD
Associate Professor, Pharmaceutical Sciences
South University School of Pharmacy
709 Mall Blvd
Savannah, GA 31406
Phone: 912-201-8133 (office), 912-656-0699 (cell)
E-Mail: acox at southuniversity.edu

-----Original Message-----
From: proteopedialist-for-users-bounces at bioinformatics.org [mailto:proteopedialist-for-users-bounces at bioinformatics.org] On Behalf Of Jaime Prilusky
Sent: Wednesday, March 28, 2012 6:21 AM
To: proteopedialist-for-users at bioinformatics.org
Subject: [Proteopedia] Jmol upgraded to 12.2

Jmol applet on Proteopedia was updated from 11.8 to 12.2 a few days ago.

This new version of Jmol incorporates several new features and commands. A description is available at http://sourceforge.net/projects/jmol/files/Jmol/Version%2012.2/

Jmol 12.2 uses a different algorithm (now DSSP) to calculate Helix/Sheet records when missing on the structure file. As a consequence, you may find differences on the rendering of some structures, both on scenes and seeded pages.

 Dr Jaime Prilusky
 Head Bioinformatics
 R&D Bioinformatics and Data Management
 Department of Biological Services
 Weizmann Institute of Science
 76100 Rehovot - Israel

 mail: Jaime.Prilusky at weizmann.ac.il<mailto:Jaime.Prilusky at weizmann.ac.il>
 tel: 972-8-9344959
 fax: 972-8-9344113
 OCA, http://oca.weizmann.ac.il (the protein structure/function database)  Proteopedia, http://proteopedia.org (because life has more than 2D)

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