Basic Information
Gene ID 100004956
Gene Name cdx1b
Full Name Caudal type homeodomain protein
Organism Danio rerio [7955]

Cross Reference
UniProt A5PLE8 UniGene Dr.111219
PDB NULL OMIM NULL
KEGG dre:100004956 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 7955.ENSDARP00000076430

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001092232 Gene3D G3DSA:1.10.10.60 IPR009057 135 206 3.20e-26 Homeodomain-like
NP_001092232 Pfam PF00046 IPR001356 148 203 3.00e-20 Homeobox domain
NP_001092232 Pfam PF04731 IPR006820 13 140 4.00e-45 Caudal-like activation domain
NP_001092232 PRINTS PR00024 IPR020479 168 179 1.80e-06 Homeodomain, metazoa
NP_001092232 PRINTS PR00024 IPR020479 183 193 1.80e-06 Homeodomain, metazoa
NP_001092232 PRINTS PR00024 IPR020479 193 202 1.80e-06 Homeodomain, metazoa
NP_001092232 PRINTS PR00031 IPR000047 175 184 2.50e-05 Helix-turn-helix motif
NP_001092232 PRINTS PR00031 IPR000047 184 200 2.50e-05 Helix-turn-helix motif
NP_001092232 ProSitePatterns PS00027 IPR017970 179 202 - Homeobox, conserved site
NP_001092232 ProSiteProfiles PS50071 IPR001356 144 204 0.00e-00 Homeobox domain
NP_001092232 SMART SM00389 IPR001356 146 208 1.60e-26 Homeobox domain
NP_001092232 SUPERFAMILY SSF46689 IPR009057 130 206 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001092232 PF04731 2.8026e-45 Caudal_act Caudal like protein activation region
NP_001092232 PF00046 1.9e-20 Homeobox Homeobox domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001092232 GO:0005634 cellular_component nucleus
NP_001092232 GO:0000976 molecular_function transcription regulatory region sequence-specific DNA binding
NP_001092232 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity