Basic Information | |||
Gene ID | 100049204 | ||
Gene Name | hoxC8a; LOC101173938 | ||
Full Name | HoxC8a | ||
Organism | Oryzias latipes [8090] |
Cross Reference | |||
UniProt | Q3V605 | UniGene | Ola.33 |
PDB | NULL | OMIM | NULL |
KEGG | ola:100049204 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSORLP00000009957 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 126 | 209 | 2.70e-28 | Homeodomain-like |
ENSORLP00000009957 | Pfam | PF00046 | IPR001356 | 150 | 206 | 6.30e-21 | Homeobox domain |
ENSORLP00000009957 | PRINTS | PR00024 | IPR020479 | 171 | 182 | 2.50e-08 | Homeodomain, metazoa |
ENSORLP00000009957 | PRINTS | PR00024 | IPR020479 | 186 | 196 | 2.50e-08 | Homeodomain, metazoa |
ENSORLP00000009957 | PRINTS | PR00024 | IPR020479 | 196 | 205 | 2.50e-08 | Homeodomain, metazoa |
ENSORLP00000009957 | ProSitePatterns | PS00027 | IPR017970 | 182 | 205 | - | Homeobox, conserved site |
ENSORLP00000009957 | ProSitePatterns | PS00032 | IPR001827 | 138 | 143 | - | Homeobox protein, antennapedia type, conserved site |
ENSORLP00000009957 | ProSiteProfiles | PS50071 | IPR001356 | 147 | 207 | 0.00e-00 | Homeobox domain |
ENSORLP00000009957 | SMART | SM00389 | IPR001356 | 149 | 211 | 1.10e-27 | Homeobox domain |
ENSORLP00000009957 | SUPERFAMILY | SSF46689 | IPR009057 | 132 | 208 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSORLP00000009957 | PF00046 | 6.3e-21 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSORLP00000009957 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSORLP00000009957 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSORLP00000009957 | GO:0007275 | biological_process | multicellular organismal development |
ENSORLP00000009957 | GO:0005634 | cellular_component | nucleus |
ENSORLP00000009957 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9913 | Bos taurus | 100295249 | 10224 | Saccoglossus kowalevskii | 100303499 |
10029 | Cricetulus griseus | 100770928 | 9597 | Pan paniscus | 100977445 |
9555 | Papio anubis | 101024136 | 39432 | Saimiri boliviensis | 101036916 |
31033 | Takifugu rubripes | 101072541 | 9669 | Mustela putorius furo | 101694202 |
7955 | Danio rerio | 30420 | 9606 | Homo sapiens | 3218 |
9598 | Pan troglodytes | 459763 | 28377 | Anolis carolinensis | ENSACAG00000006423 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000000683 | 9483 | Callithrix jacchus | ENSCJAG00000018828 |
10141 | Cavia porcellus | ENSCPOG00000024489 | 10020 | Dipodomys ordii | ENSDORG00000006996 |
9796 | Equus caballus | ENSECAG00000021980 | 9371 | Echinops telfairi | ENSETEG00000011076 |
69293 | Gasterosteus aculeatus | ENSGACG00000009401 | 8049 | Gadus morhua | ENSGMOG00000017889 |
7897 | Latimeria chalumnae | ENSLACG00000015099 | 9785 | Loxodonta africana | ENSLAFG00000018140 |
9315 | Macropus eugenii | ENSMEUG00000006929 | 9103 | Meleagris gallopavo | ENSMGAG00000017418 |
59463 | Myotis lucifugus | ENSMLUG00000003097 | 13616 | Monodelphis domestica | ENSMODG00000009593 |
9986 | Oryctolagus cuniculus | ENSOCUG00000004741 | 30611 | Otolemur garnettii | ENSOGAG00000003619 |
9813 | Procavia capensis | ENSPCAG00000015753 | 7757 | Petromyzon marinus | ENSPMAG00000004598 |
9601 | Pongo abelii | ENSPPYG00000012961 | 10116 | Rattus norvegicus | ENSRNOG00000042480 |
42254 | Sorex araneus | ENSSARG00000005550 | 9823 | Sus scrofa | ENSSSCG00000017537 |
37347 | Tupaia belangeri | ENSTBEG00000011462 | 59729 | Taeniopygia guttata | ENSTGUG00000015572 |
99883 | Tetraodon nigroviridis | ENSTNIG00000001762 | 9478 | Tarsius syrichta | ENSTSYG00000001418 |
9685 | Felis catus | 101090273 | 9595 | Gorilla gorilla | 101128899 |
43179 | Ictidomys tridecemlineatus | 101962854 | 8083 | Xiphophorus maculatus | 102237903 |
13735 | Pelodiscus sinensis | 102445090 | 10090 | Mus musculus | 15416 |
8364 | Xenopus tropicalis | 448482 | 9615 | Canis familiaris | 491059 |
30608 | Microcebus murinus | ENSMICG00000011718 | 9544 | Macaca mulatta | ENSMMUG00000000928 |
61853 | Nomascus leucogenys | ENSNLEG00000006003 | 9258 | Ornithorhynchus anatinus | ENSOANG00000014218 |
9978 | Ochotona princeps | ENSOPRG00000004065 | 132908 | Pteropus vampyrus | ENSPVAG00000015529 |
9305 | Sarcophilus harrisii | ENSSHAG00000016034 | 9739 | Tursiops truncatus | ENSTTRG00000004538 |