Basic Information | |||
Gene ID | 100124310 | ||
Gene Name | neurod4 | ||
Full Name | Neurogenic differentiation factor | ||
Organism | Xenopus tropicalis [8364] |
Cross Reference | |||
UniProt | B4F715 | UniGene | Str.53567 |
PDB | NULL | OMIM | NULL |
KEGG | xtr:100124310 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 8364.ENSXETP00000014760 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSXETP00000014760 | Gene3D | G3DSA:4.10.280.10 | IPR011598 | 80 | 137 | 5.60e-25 | Myc-type, basic helix-loop-helix (bHLH) domain |
ENSXETP00000014760 | Pfam | PF00010 | IPR011598 | 80 | 131 | 1.20e-15 | Myc-type, basic helix-loop-helix (bHLH) domain |
ENSXETP00000014760 | Pfam | PF12533 | IPR022575 | 138 | 256 | 4.70e-40 | Neurogenic differentiation factor, domain of unknown function |
ENSXETP00000014760 | PIRSF | PIRSF015618 | IPR016637 | 1 | 316 | 5.40e-202 | Transcription factor, basic helix-loop-helix, NeuroD |
ENSXETP00000014760 | ProSiteProfiles | PS50888 | IPR011598 | 79 | 131 | 0.00e-00 | Myc-type, basic helix-loop-helix (bHLH) domain |
ENSXETP00000014760 | SMART | SM00353 | IPR011598 | 85 | 137 | 4.00e-18 | Myc-type, basic helix-loop-helix (bHLH) domain |
ENSXETP00000014760 | SUPERFAMILY | SSF47459 | IPR011598 | 79 | 142 | 0.00e-00 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSXETP00000014760 | PF12533 | 2e-40 | Neuro_bHLH | Neuronal helix-loop-helix transcription factor |
ENSXETP00000014760 | PF00010 | 1.2e-15 | HLH | Helix-loop-helix DNA-binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSXETP00000014760 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSXETP00000014760 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSXETP00000014760 | GO:0035881 | biological_process | amacrine cell differentiation |
ENSXETP00000014760 | GO:0045597 | biological_process | positive regulation of cell differentiation |
ENSXETP00000014760 | GO:0005634 | cellular_component | nucleus |
ENSXETP00000014760 | GO:0003677 | molecular_function | DNA binding |
ENSXETP00000014760 | GO:0046983 | molecular_function | protein dimerization activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100067943 | 13616 | Monodelphis domestica | 100011525 |
9823 | Sus scrofa | 100151884 | 10224 | Saccoglossus kowalevskii | 100366425 |
9483 | Callithrix jacchus | 100390256 | 9103 | Meleagris gallopavo | 100542925 |
28377 | Anolis carolinensis | 100552466 | 61853 | Nomascus leucogenys | 100602311 |
8128 | Oreochromis niloticus | 100709075 | 9305 | Sarcophilus harrisii | 100924118 |
9555 | Papio anubis | 101008660 | 39432 | Saimiri boliviensis | 101047841 |
9685 | Felis catus | 101095025 | 9595 | Gorilla gorilla | 101145152 |
9669 | Mustela putorius furo | 101680563 | 43179 | Ictidomys tridecemlineatus | 101961038 |
7897 | Latimeria chalumnae | 102346727 | 59463 | Myotis lucifugus | 102424444 |
13735 | Pelodiscus sinensis | 102463039 | 10090 | Mus musculus | 18012 |
6239 | Caenorhabditis elegans | 183212 | 10116 | Rattus norvegicus | 288821 |
9598 | Pan troglodytes | 459794 | 9615 | Canis familiaris | 491026 |
9606 | Homo sapiens | 58158 | 9544 | Macaca mulatta | 694337 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000003939 | 7955 | Danio rerio | ENSDARG00000016854 |
9361 | Dasypus novemcinctus | ENSDNOG00000009650 | 10020 | Dipodomys ordii | ENSDORG00000010174 |
9371 | Echinops telfairi | ENSETEG00000009519 | 69293 | Gasterosteus aculeatus | ENSGACG00000008952 |
9031 | Gallus gallus | ENSGALG00000024396 | 8049 | Gadus morhua | ENSGMOG00000006899 |
9315 | Macropus eugenii | ENSMEUG00000016098 | 30608 | Microcebus murinus | ENSMICG00000008491 |
9258 | Ornithorhynchus anatinus | ENSOANG00000011626 | 9986 | Oryctolagus cuniculus | ENSOCUG00000023536 |
9978 | Ochotona princeps | ENSOPRG00000008607 | 8090 | Oryzias latipes | ENSORLG00000007467 |
9813 | Procavia capensis | ENSPCAG00000002075 | 7757 | Petromyzon marinus | ENSPMAG00000007548 |
42254 | Sorex araneus | ENSSARG00000010152 | 59729 | Taeniopygia guttata | ENSTGUG00000016747 |
99883 | Tetraodon nigroviridis | ENSTNIG00000002442 | 31033 | Takifugu rubripes | ENSTRUG00000013273 |
9478 | Tarsius syrichta | ENSTSYG00000003704 | 9739 | Tursiops truncatus | ENSTTRG00000016039 |
30538 | Vicugna pacos | ENSVPAG00000012065 | 8083 | Xiphophorus maculatus | ENSXMAG00000011061 |
9785 | Loxodonta africana | 100677518 | 10141 | Cavia porcellus | 100724964 |
10029 | Cricetulus griseus | 100753246 | 9597 | Pan paniscus | 100993852 |
9913 | Bos taurus | 539487 | 9365 | Erinaceus europaeus | ENSEEUG00000007073 |
30611 | Otolemur garnettii | ENSOGAG00000009685 | 9601 | Pongo abelii | ENSPPYG00000004613 |
132908 | Pteropus vampyrus | ENSPVAG00000014789 | 37347 | Tupaia belangeri | ENSTBEG00000000432 |