Basic Information | |||
Gene ID | 100230146 | ||
Gene Name | HMGB1 | ||
Full Name | Uncharacterized protein | ||
Organism | Taeniopygia guttata [59729] |
Cross Reference | |||
UniProt | H0ZN87 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | tgu:100230146 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_002194652 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 8 | 78 | 2.80e-29 | High mobility group box domain |
XP_002194652 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 93 | 167 | 9.80e-32 | High mobility group box domain |
XP_002194652 | Pfam | PF00505 | IPR009071 | 95 | 163 | 1.70e-27 | High mobility group box domain |
XP_002194652 | Pfam | PF09011 | IPR009071 | 6 | 78 | 1.70e-26 | High mobility group box domain |
XP_002194652 | ProSitePatterns | PS00353 | IPR017967 | 41 | 52 | - | HMG box A DNA-binding domain, conserved site |
XP_002194652 | ProSiteProfiles | PS50118 | IPR009071 | 95 | 163 | 0.00e-00 | High mobility group box domain |
XP_002194652 | ProSiteProfiles | PS50118 | IPR009071 | 9 | 79 | 0.00e-00 | High mobility group box domain |
XP_002194652 | SMART | SM00398 | IPR009071 | 8 | 80 | 7.90e-28 | High mobility group box domain |
XP_002194652 | SMART | SM00398 | IPR009071 | 94 | 164 | 1.60e-33 | High mobility group box domain |
XP_002194652 | SUPERFAMILY | SSF47095 | IPR009071 | 3 | 81 | 0.00e-00 | High mobility group box domain |
XP_002194652 | SUPERFAMILY | SSF47095 | IPR009071 | 79 | 164 | 0.00e-00 | High mobility group box domain |
XP_002194652 | SUPERFAMILY | SSF48371 | IPR016024 | 179 | 214 | 0.00e-00 | Armadillo-type fold |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_002194652 | PF00505 | 4.1002e-42 | HMG_box | HMG (high mobility group) box |
XP_002194652 | PF09011 | 1.10002e-41 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_002194652 | GO:0005634 | cellular_component | nucleus |
XP_002194652 | GO:0005694 | cellular_component | chromosome |
XP_002194652 | GO:0003677 | molecular_function | DNA binding |