Basic Information
Gene ID 100304448
Gene Name sox6a
Full Name SRY-box containing gene 6a
Organism Oryzias latipes [8090]

Cross Reference
UniProt C3VV09 UniGene Ola.28090
PDB NULL OMIM NULL
KEGG ola:100304448 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8090.ENSORLP00000001551

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSORLP00000001551 Gene3D G3DSA:1.10.30.10 IPR009071 598 678 2.80e-33 High mobility group box domain
ENSORLP00000001551 PANTHER PTHR10270:SF89 IPR027153 41 819 0.00e-00 Transcription factor Sox-6
ENSORLP00000001551 Pfam PF00505 IPR009071 600 668 5.80e-22 High mobility group box domain
ENSORLP00000001551 ProSiteProfiles PS50118 IPR009071 600 668 0.00e-00 High mobility group box domain
ENSORLP00000001551 SMART SM00398 IPR009071 599 669 3.20e-28 High mobility group box domain
ENSORLP00000001551 SUPERFAMILY SSF47095 IPR009071 599 677 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSORLP00000001551 PF00505 2e-22 HMG_box HMG (high mobility group) box
ENSORLP00000001551 PF09011 4e-09 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSORLP00000001551 GO:0006351 biological_process transcription, DNA-templated
ENSORLP00000001551 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSORLP00000001551 GO:0005634 cellular_component nucleus
ENSORLP00000001551 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7668 Strongylocentrotus purpuratus 373200 9358 Choloepus hoffmanni ENSCHOG00000005751
9371 Echinops telfairi ENSETEG00000001898 69293 Gasterosteus aculeatus ENSGACG00000006649
8128 Oreochromis niloticus ENSONIG00000015539 37347 Tupaia belangeri ENSTBEG00000002476
31033 Takifugu rubripes ENSTRUG00000014656 8083 Xiphophorus maculatus ENSXMAG00000012894