Basic Information | |||
Gene ID | 100313690 | ||
Gene Name | LOC100313690 | ||
Full Name | PREDICTED: nubbin-like transcription factor, partial [Saccoglossuskowalevskii]. | ||
Organism | Saccoglossus kowalevskii [10224] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_002734113 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 59 | 127 | 7.00e-24 | Homeodomain-like |
XP_002734113 | Gene3D | G3DSA:1.10.260.40 | IPR010982 | 2 | 48 | 4.40e-25 | Lambda repressor-like, DNA-binding domain |
XP_002734113 | Pfam | PF00046 | IPR001356 | 71 | 127 | 4.30e-18 | Homeobox domain |
XP_002734113 | Pfam | PF00157 | IPR000327 | 2 | 48 | 6.30e-24 | POU-specific |
XP_002734113 | PRINTS | PR00028 | IPR013847 | 104 | 119 | 8.60e-31 | POU domain |
XP_002734113 | PRINTS | PR00028 | IPR013847 | 16 | 29 | 8.60e-31 | POU domain |
XP_002734113 | PRINTS | PR00028 | IPR013847 | 32 | 47 | 8.60e-31 | POU domain |
XP_002734113 | PRINTS | PR00028 | IPR013847 | 69 | 89 | 8.60e-31 | POU domain |
XP_002734113 | ProSitePatterns | PS00027 | IPR017970 | 103 | 126 | - | Homeobox, conserved site |
XP_002734113 | ProSitePatterns | PS00465 | IPR000327 | 16 | 29 | - | POU-specific |
XP_002734113 | ProSiteProfiles | PS50071 | IPR001356 | 68 | 128 | 0.00e-00 | Homeobox domain |
XP_002734113 | ProSiteProfiles | PS51179 | IPR000327 | 1 | 48 | 0.00e-00 | POU-specific |
XP_002734113 | SMART | SM00352 | IPR000327 | 1 | 48 | 2.90e-23 | POU-specific |
XP_002734113 | SMART | SM00389 | IPR001356 | 70 | 132 | 4.90e-21 | Homeobox domain |
XP_002734113 | SUPERFAMILY | SSF46689 | IPR009057 | 51 | 129 | 0.00e-00 | Homeodomain-like |
XP_002734113 | SUPERFAMILY | SSF47413 | IPR010982 | 2 | 48 | 0.00e-00 | Lambda repressor-like, DNA-binding domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_002734113 | PF00157 | 2.7e-24 | Pou | Pou domain - N-terminal to homeobox domain |
XP_002734113 | PF00046 | 2.1e-18 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_002734113 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_002734113 | GO:0005634 | cellular_component | nucleus |
XP_002734113 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_002734113 | GO:0043565 | molecular_function | sequence-specific DNA binding |