Basic Information | |||
Gene ID | 100366771 | ||
Gene Name | LOC100366771 | ||
Full Name | PREDICTED: upstream binding transcription factor, RNA polymeraseI-like [Saccoglossus kowalevskii]. | ||
Organism | Saccoglossus kowalevskii [10224] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_002738418 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 158 | 243 | 1.10e-24 | High mobility group box domain |
XP_002738418 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 247 | 338 | 1.70e-18 | High mobility group box domain |
XP_002738418 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 347 | 438 | 8.80e-19 | High mobility group box domain |
XP_002738418 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 449 | 537 | 7.80e-22 | High mobility group box domain |
XP_002738418 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 548 | 609 | 4.70e-06 | High mobility group box domain |
XP_002738418 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 615 | 700 | 1.70e-14 | High mobility group box domain |
XP_002738418 | Pfam | PF00505 | IPR009071 | 165 | 232 | 2.40e-16 | High mobility group box domain |
XP_002738418 | Pfam | PF00505 | IPR009071 | 255 | 321 | 2.60e-08 | High mobility group box domain |
XP_002738418 | Pfam | PF00505 | IPR009071 | 456 | 523 | 3.10e-12 | High mobility group box domain |
XP_002738418 | Pfam | PF09011 | IPR009071 | 355 | 411 | 1.80e-06 | High mobility group box domain |
XP_002738418 | ProSiteProfiles | PS50118 | IPR009071 | 165 | 233 | 0.00e-00 | High mobility group box domain |
XP_002738418 | ProSiteProfiles | PS50118 | IPR009071 | 254 | 322 | 0.00e-00 | High mobility group box domain |
XP_002738418 | ProSiteProfiles | PS50118 | IPR009071 | 353 | 418 | 0.00e-00 | High mobility group box domain |
XP_002738418 | ProSiteProfiles | PS50118 | IPR009071 | 456 | 524 | 0.00e-00 | High mobility group box domain |
XP_002738418 | ProSiteProfiles | PS50118 | IPR009071 | 620 | 686 | 0.00e-00 | High mobility group box domain |
XP_002738418 | SMART | SM00398 | IPR009071 | 164 | 234 | 2.60e-21 | High mobility group box domain |
XP_002738418 | SMART | SM00398 | IPR009071 | 253 | 323 | 9.40e-10 | High mobility group box domain |
XP_002738418 | SMART | SM00398 | IPR009071 | 352 | 419 | 5.50e-13 | High mobility group box domain |
XP_002738418 | SMART | SM00398 | IPR009071 | 455 | 525 | 1.50e-17 | High mobility group box domain |
XP_002738418 | SMART | SM00398 | IPR009071 | 544 | 613 | 3.90e-02 | High mobility group box domain |
XP_002738418 | SMART | SM00398 | IPR009071 | 619 | 687 | 1.40e-07 | High mobility group box domain |
XP_002738418 | SUPERFAMILY | SSF47095 | IPR009071 | 159 | 238 | 0.00e-00 | High mobility group box domain |
XP_002738418 | SUPERFAMILY | SSF47095 | IPR009071 | 252 | 334 | 0.00e-00 | High mobility group box domain |
XP_002738418 | SUPERFAMILY | SSF47095 | IPR009071 | 338 | 430 | 0.00e-00 | High mobility group box domain |
XP_002738418 | SUPERFAMILY | SSF47095 | IPR009071 | 449 | 529 | 0.00e-00 | High mobility group box domain |
XP_002738418 | SUPERFAMILY | SSF47095 | IPR009071 | 616 | 699 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_002738418 | PF00505 | 0 | HMG_box | HMG (high mobility group) box |
XP_002738418 | PF09011 | 5.5e-22 | HMG_box_2 | HMG-box domain |
XP_002738418 | PF14887 | 1.4e-07 | HMG_box_5 | HMG (high mobility group) box 5 |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_002738418 | GO:0005634 | cellular_component | nucleus |
XP_002738418 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7029 | Acyrthosiphon pisum | 100160778 | 9823 | Sus scrofa | 100621582 |
10029 | Cricetulus griseus | 100689026 | 34638 | Metaseiulus occidentalis | 100908702 |
30611 | Otolemur garnettii | 100966336 | 9597 | Pan paniscus | 100987128 |
9555 | Papio anubis | 101005122 | 39432 | Saimiri boliviensis | 101033990 |
9595 | Gorilla gorilla | 101129769 | 9669 | Mustela putorius furo | 101680939 |
43179 | Ictidomys tridecemlineatus | 101973638 | 7668 | Strongylocentrotus purpuratus | 593781 |
7070 | Tribolium castaneum | 658441 | 28377 | Anolis carolinensis | ENSACAG00000017186 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000018342 | 9615 | Canis familiaris | ENSCAFG00000014260 |
7719 | Ciona intestinalis | ENSCING00000011375 | 10141 | Cavia porcellus | ENSCPOG00000009039 |
10020 | Dipodomys ordii | ENSDORG00000013203 | 9796 | Equus caballus | ENSECAG00000019162 |
9365 | Erinaceus europaeus | ENSEEUG00000011384 | 69293 | Gasterosteus aculeatus | ENSGACG00000009598 |
9031 | Gallus gallus | ENSGALG00000027787 | 8049 | Gadus morhua | ENSGMOG00000001531 |
30608 | Microcebus murinus | ENSMICG00000008107 | 59463 | Myotis lucifugus | ENSMLUG00000001898 |
9544 | Macaca mulatta | ENSMMUG00000019924 | 61853 | Nomascus leucogenys | ENSNLEG00000005450 |
9986 | Oryctolagus cuniculus | ENSOCUG00000023028 | 8128 | Oreochromis niloticus | ENSONIG00000000796 |
9978 | Ochotona princeps | ENSOPRG00000008676 | 9813 | Procavia capensis | ENSPCAG00000012099 |
7757 | Petromyzon marinus | ENSPMAG00000005214 | 9598 | Pan troglodytes | ENSPTRG00000009269 |
132908 | Pteropus vampyrus | ENSPVAG00000013724 | 59729 | Taeniopygia guttata | ENSTGUG00000001880 |
99883 | Tetraodon nigroviridis | ENSTNIG00000004271 | 9739 | Tursiops truncatus | ENSTTRG00000010500 |
8364 | Xenopus tropicalis | ENSXETG00000003356 | 8083 | Xiphophorus maculatus | ENSXMAG00000008248 |
9785 | Loxodonta africana | 100658587 | 9685 | Felis catus | 101099160 |
10090 | Mus musculus | 21429 | 10116 | Rattus norvegicus | 25574 |
9606 | Homo sapiens | 7343 | 9483 | Callithrix jacchus | ENSCJAG00000010066 |
7897 | Latimeria chalumnae | ENSLACG00000016842 | 9315 | Macropus eugenii | ENSMEUG00000002879 |
9103 | Meleagris gallopavo | ENSMGAG00000002383 | 8090 | Oryzias latipes | ENSORLG00000002593 |