Basic Information | |||
Gene ID | 100375648 | ||
Gene Name | LOC100375648 | ||
Full Name | PREDICTED: retinoic acid receptor, beta-like [Saccoglossuskowalevskii]. | ||
Organism | Saccoglossus kowalevskii [10224] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_002742241 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 310 | 576 | 3.90e-84 | Nuclear hormone receptor, ligand-binding |
XP_002742241 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 256 | 309 | 2.40e-27 | Zinc finger, NHR/GATA-type |
XP_002742241 | Pfam | PF00104 | IPR000536 | 375 | 554 | 9.00e-36 | Nuclear hormone receptor, ligand-binding, core |
XP_002742241 | Pfam | PF00105 | IPR001628 | 255 | 323 | 6.90e-32 | Zinc finger, nuclear hormone receptor-type |
XP_002742241 | PRINTS | PR00047 | IPR001628 | 256 | 272 | 4.10e-18 | Zinc finger, nuclear hormone receptor-type |
XP_002742241 | PRINTS | PR00047 | IPR001628 | 272 | 287 | 4.10e-18 | Zinc finger, nuclear hormone receptor-type |
XP_002742241 | PRINTS | PR00047 | IPR001628 | 305 | 313 | 4.10e-18 | Zinc finger, nuclear hormone receptor-type |
XP_002742241 | PRINTS | PR00047 | IPR001628 | 313 | 321 | 4.10e-18 | Zinc finger, nuclear hormone receptor-type |
XP_002742241 | PRINTS | PR00398 | IPR001723 | 317 | 327 | 9.30e-34 | Steroid hormone receptor |
XP_002742241 | PRINTS | PR00398 | IPR001723 | 391 | 412 | 9.30e-34 | Steroid hormone receptor |
XP_002742241 | PRINTS | PR00398 | IPR001723 | 412 | 428 | 9.30e-34 | Steroid hormone receptor |
XP_002742241 | PRINTS | PR00398 | IPR001723 | 479 | 494 | 9.30e-34 | Steroid hormone receptor |
XP_002742241 | PRINTS | PR00398 | IPR001723 | 536 | 553 | 9.30e-34 | Steroid hormone receptor |
XP_002742241 | PRINTS | PR01292 | IPR003078 | 322 | 335 | 6.20e-30 | Retinoic acid receptor |
XP_002742241 | PRINTS | PR01292 | IPR003078 | 434 | 458 | 6.20e-30 | Retinoic acid receptor |
XP_002742241 | PRINTS | PR01292 | IPR003078 | 471 | 483 | 6.20e-30 | Retinoic acid receptor |
XP_002742241 | PRINTS | PR01292 | IPR003078 | 501 | 522 | 6.20e-30 | Retinoic acid receptor |
XP_002742241 | PRINTS | PR01292 | IPR003078 | 545 | 560 | 6.20e-30 | Retinoic acid receptor |
XP_002742241 | PRINTS | PR01292 | IPR003078 | 568 | 581 | 6.20e-30 | Retinoic acid receptor |
XP_002742241 | ProSitePatterns | PS00031 | IPR001628 | 256 | 282 | - | Zinc finger, nuclear hormone receptor-type |
XP_002742241 | ProSiteProfiles | PS51030 | IPR001628 | 253 | 328 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
XP_002742241 | SMART | SM00399 | IPR001628 | 253 | 324 | 2.30e-41 | Zinc finger, nuclear hormone receptor-type |
XP_002742241 | SMART | SM00430 | IPR000536 | 390 | 548 | 2.80e-41 | Nuclear hormone receptor, ligand-binding, core |
XP_002742241 | SUPERFAMILY | SSF48508 | IPR008946 | 304 | 575 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_002742241 | PF00104 | 3e-36 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
XP_002742241 | PF00105 | 3.2e-32 | zf-C4 | Zinc finger, C4 type (two domains) |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_002742241 | GO:0005634 | cellular_component | nucleus |
XP_002742241 | GO:0003707 | molecular_function | steroid hormone receptor activity |
XP_002742241 | GO:0003708 | molecular_function | retinoic acid receptor activity |
XP_002742241 | GO:0008270 | molecular_function | zinc ion binding |
XP_002742241 | GO:0043565 | molecular_function | sequence-specific DNA binding |