Basic Information | |||
Gene ID | 100378859 | ||
Gene Name | LOC100378859 | ||
Full Name | PREDICTED: interferon regulatory factor 4-like [Saccoglossuskowalevskii]. | ||
Organism | Saccoglossus kowalevskii [10224] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_002733019 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 13 | 123 | 2.80e-47 | Winged helix-turn-helix DNA-binding domain |
XP_002733019 | Gene3D | G3DSA:2.60.200.10 | IPR017855 | 302 | 530 | 7.60e-43 | SMAD domain-like |
XP_002733019 | Pfam | PF00605 | IPR001346 | 15 | 123 | 3.90e-44 | Interferon regulatory factor DNA-binding domain |
XP_002733019 | Pfam | PF10401 | IPR019471 | 317 | 482 | 2.70e-27 | Interferon regulatory factor-3 |
XP_002733019 | PRINTS | PR00267 | IPR001346 | 17 | 36 | 3.40e-24 | Interferon regulatory factor DNA-binding domain |
XP_002733019 | PRINTS | PR00267 | IPR001346 | 43 | 56 | 3.40e-24 | Interferon regulatory factor DNA-binding domain |
XP_002733019 | PRINTS | PR00267 | IPR001346 | 61 | 78 | 3.40e-24 | Interferon regulatory factor DNA-binding domain |
XP_002733019 | PRINTS | PR00267 | IPR001346 | 84 | 106 | 3.40e-24 | Interferon regulatory factor DNA-binding domain |
XP_002733019 | ProSiteProfiles | PS51507 | IPR001346 | 15 | 123 | 0.00e-00 | Interferon regulatory factor DNA-binding domain |
XP_002733019 | SMART | SM00348 | IPR001346 | 11 | 124 | 1.40e-58 | Interferon regulatory factor DNA-binding domain |
XP_002733019 | SUPERFAMILY | SSF49879 | IPR008984 | 311 | 484 | 0.00e-00 | SMAD/FHA domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_002733019 | PF00605 | 2.10195e-44 | IRF | Interferon regulatory factor transcription factor |
XP_002733019 | PF10401 | 1.2e-27 | IRF-3 | Interferon-regulatory factor 3 |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_002733019 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_002733019 | GO:0005634 | cellular_component | nucleus |
XP_002733019 | GO:0000975 | molecular_function | regulatory region DNA binding |
XP_002733019 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
6087 | Hydra magnipapillata | 100201914 | 9796 | Equus caballus | 100049827 |
39432 | Saimiri boliviensis | 101053093 | 9669 | Mustela putorius furo | 101691875 |
43179 | Ictidomys tridecemlineatus | 101978233 | 9031 | Gallus gallus | 374179 |
28377 | Anolis carolinensis | ENSACAG00000005409 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000018268 |
9483 | Callithrix jacchus | ENSCJAG00000019524 | 51511 | Ciona savignyi | ENSCSAVG00000003970 |
9685 | Felis catus | ENSFCAG00000022941 | 9315 | Macropus eugenii | ENSMEUG00000002440 |
9813 | Procavia capensis | ENSPCAG00000004460 | 59729 | Taeniopygia guttata | ENSTGUG00000006609 |
31033 | Takifugu rubripes | ENSTRUG00000018213 | 9103 | Meleagris gallopavo | 100542267 |
61853 | Nomascus leucogenys | 100590106 | 8128 | Oreochromis niloticus | 100704843 |
10029 | Cricetulus griseus | 100755524 | 9597 | Pan paniscus | 100969190 |
9555 | Papio anubis | 101020216 | 8083 | Xiphophorus maculatus | 102228347 |
13735 | Pelodiscus sinensis | 102456360 | 9606 | Homo sapiens | 10379 |
10090 | Mus musculus | 16364 | 10116 | Rattus norvegicus | 291100 |
7955 | Danio rerio | 403013 | 7668 | Strongylocentrotus purpuratus | 578336 |
9544 | Macaca mulatta | 722883 | 9913 | Bos taurus | ENSBTAG00000002929 |
9615 | Canis familiaris | ENSCAFG00000009156 | 9358 | Choloepus hoffmanni | ENSCHOG00000010399 |
7719 | Ciona intestinalis | ENSCING00000002820 | 10141 | Cavia porcellus | ENSCPOG00000003562 |
9361 | Dasypus novemcinctus | ENSDNOG00000013370 | 10020 | Dipodomys ordii | ENSDORG00000014895 |
9365 | Erinaceus europaeus | ENSEEUG00000002644 | 9371 | Echinops telfairi | ENSETEG00000018472 |
69293 | Gasterosteus aculeatus | ENSGACG00000015958 | 9595 | Gorilla gorilla | ENSGGOG00000012342 |
8049 | Gadus morhua | ENSGMOG00000016994 | 7897 | Latimeria chalumnae | ENSLACG00000005859 |
9785 | Loxodonta africana | ENSLAFG00000017235 | 59463 | Myotis lucifugus | ENSMLUG00000010058 |
13616 | Monodelphis domestica | ENSMODG00000008383 | 9986 | Oryctolagus cuniculus | ENSOCUG00000009374 |
30611 | Otolemur garnettii | ENSOGAG00000014574 | 9978 | Ochotona princeps | ENSOPRG00000012683 |
8090 | Oryzias latipes | ENSORLG00000017242 | 9601 | Pongo abelii | ENSPPYG00000016161 |
9598 | Pan troglodytes | ENSPTRG00000017656 | 132908 | Pteropus vampyrus | ENSPVAG00000005078 |
9305 | Sarcophilus harrisii | ENSSHAG00000015592 | 9823 | Sus scrofa | ENSSSCG00000023184 |
37347 | Tupaia belangeri | ENSTBEG00000012240 | 99883 | Tetraodon nigroviridis | ENSTNIG00000005370 |
9478 | Tarsius syrichta | ENSTSYG00000007445 | 9739 | Tursiops truncatus | ENSTTRG00000001849 |
8364 | Xenopus tropicalis | ENSXETG00000011413 |