Basic Information | |||
Gene ID | 100398590 | ||
Gene Name | PMS1 | ||
Full Name | Uncharacterized protein | ||
Organism | Callithrix jacchus [9483] |
Cross Reference | |||
UniProt | F6WQU7 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_002749606 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 570 | 636 | 3.10e-17 | High mobility group box domain |
XP_002749606 | Gene3D | G3DSA:3.30.230.10 | IPR014721 | 204 | 337 | 3.50e-28 | Ribosomal protein S5 domain 2-type fold, subgroup |
XP_002749606 | Gene3D | G3DSA:3.30.565.10 | IPR003594 | 2 | 203 | 1.40e-64 | Histidine kinase-like ATPase, ATP-binding domain |
XP_002749606 | PANTHER | PTHR10073 | IPR002099 | 1 | 930 | 0.00e-00 | DNA mismatch repair protein family |
XP_002749606 | Pfam | PF00505 | IPR009071 | 571 | 637 | 7.70e-14 | High mobility group box domain |
XP_002749606 | Pfam | PF01119 | IPR013507 | 210 | 336 | 1.00e-25 | DNA mismatch repair protein, C-terminal |
XP_002749606 | ProSitePatterns | PS00058 | IPR014762 | 91 | 97 | - | DNA mismatch repair, conserved site |
XP_002749606 | ProSiteProfiles | PS50118 | IPR009071 | 571 | 639 | 0.00e-00 | High mobility group box domain |
XP_002749606 | SMART | SM00387 | IPR003594 | 16 | 151 | 4.90e-03 | Histidine kinase-like ATPase, ATP-binding domain |
XP_002749606 | SMART | SM00398 | IPR009071 | 570 | 640 | 5.30e-25 | High mobility group box domain |
XP_002749606 | SUPERFAMILY | SSF47095 | IPR009071 | 559 | 636 | 0.00e-00 | High mobility group box domain |
XP_002749606 | SUPERFAMILY | SSF54211 | IPR020568 | 191 | 337 | 0.00e-00 | Ribosomal protein S5 domain 2-type fold |
XP_002749606 | SUPERFAMILY | SSF55874 | IPR003594 | 16 | 200 | 0.00e-00 | Histidine kinase-like ATPase, ATP-binding domain |
XP_002749606 | TIGRFAM | TIGR00585 | IPR002099 | 1 | 318 | 2.90e-100 | DNA mismatch repair protein family |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_002749606 | PF01119 | 9.4e-26 | DNA_mis_repair | DNA mismatch repair protein, C-terminal domain |
XP_002749606 | PF00505 | 3.3e-14 | HMG_box | HMG (high mobility group) box |
XP_002749606 | PF13589 | 6.9e-13 | HATPase_c_3 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
XP_002749606 | PF02518 | 1.7e-11 | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
XP_002749606 | PF09011 | 4e-10 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_002749606 | GO:0006200 | biological_process | ATP catabolic process |
XP_002749606 | GO:0006298 | biological_process | mismatch repair |
XP_002749606 | GO:0007131 | biological_process | reciprocal meiotic recombination |
XP_002749606 | GO:0032300 | cellular_component | mismatch repair complex |
XP_002749606 | GO:0032389 | cellular_component | MutLalpha complex |
XP_002749606 | GO:0003697 | molecular_function | single-stranded DNA binding |
XP_002749606 | GO:0005524 | molecular_function | ATP binding |
XP_002749606 | GO:0016887 | molecular_function | ATPase activity |
XP_002749606 | GO:0030983 | molecular_function | mismatched DNA binding |
XP_002749606 | GO:0032407 | molecular_function | MutSalpha complex binding |