Basic Information | |||
Gene ID | 100401619 | ||
Gene Name | HMG20A | ||
Full Name | High mobility group protein 20A | ||
Organism | Callithrix jacchus [9483] |
Cross Reference | |||
UniProt | F7HUK8 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSCJAP00000047384 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 95 | 174 | 6.20e-26 | High mobility group box domain |
ENSCJAP00000047384 | Pfam | PF00505 | IPR009071 | 103 | 170 | 9.40e-19 | High mobility group box domain |
ENSCJAP00000047384 | ProSiteProfiles | PS50118 | IPR009071 | 103 | 171 | 0.00e-00 | High mobility group box domain |
ENSCJAP00000047384 | SMART | SM00398 | IPR009071 | 102 | 172 | 6.10e-24 | High mobility group box domain |
ENSCJAP00000047384 | SUPERFAMILY | SSF47095 | IPR009071 | 89 | 172 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSCJAP00000047384 | PF00505 | 9.4e-19 | HMG_box | HMG (high mobility group) box |
ENSCJAP00000047384 | PF09011 | 3.4e-13 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSCJAP00000047384 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSCJAP00000047384 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSCJAP00000047384 | GO:0005634 | cellular_component | nucleus |
ENSCJAP00000047384 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100011841 | 9258 | Ornithorhynchus anatinus | 100074790 |
7425 | Nasonia vitripennis | 100117847 | 6087 | Hydra magnipapillata | 100210175 |
59729 | Taeniopygia guttata | 100226067 | 7029 | Acyrthosiphon pisum | 100161069 |
9595 | Gorilla gorilla | 101130601 | 13735 | Pelodiscus sinensis | 102449772 |
9739 | Tursiops truncatus | ENSTTRG00000006500 | 9103 | Meleagris gallopavo | 100543882 |
30195 | Bombus terrestris | 100646842 | 9785 | Loxodonta africana | 100657452 |
8128 | Oreochromis niloticus | 100712018 | 9823 | Sus scrofa | 100737571 |
132113 | Bombus impatiens | 100743290 | 10029 | Cricetulus griseus | 100759297 |
7463 | Apis florea | 100863063 | 143995 | Megachile rotundata | 100878925 |
34638 | Metaseiulus occidentalis | 100906238 | 30611 | Otolemur garnettii | 100963159 |
9597 | Pan paniscus | 100985384 | 9555 | Papio anubis | 101024689 |
39432 | Saimiri boliviensis | 101051484 | 8090 | Oryzias latipes | 101158691 |
9669 | Mustela putorius furo | 101687625 | 43179 | Ictidomys tridecemlineatus | 101977493 |
8083 | Xiphophorus maculatus | 102220835 | 7897 | Latimeria chalumnae | 102346584 |
59463 | Myotis lucifugus | 102425956 | 9606 | Homo sapiens | 10363 |
10116 | Rattus norvegicus | 315689 | 8364 | Xenopus tropicalis | 448440 |
9615 | Canis familiaris | 487661 | 9913 | Bos taurus | 513719 |
7668 | Strongylocentrotus purpuratus | 585561 | 7070 | Tribolium castaneum | 663049 |
10090 | Mus musculus | 66867 | 28377 | Anolis carolinensis | ENSACAG00000011520 |
9358 | Choloepus hoffmanni | ENSCHOG00000012116 | 51511 | Ciona savignyi | ENSCSAVG00000001086 |
10020 | Dipodomys ordii | ENSDORG00000000623 | 9365 | Erinaceus europaeus | ENSEEUG00000004472 |
9371 | Echinops telfairi | ENSETEG00000015812 | 9685 | Felis catus | ENSFCAG00000022539 |
69293 | Gasterosteus aculeatus | ENSGACG00000003466 | 9031 | Gallus gallus | ENSGALG00000002746 |
8049 | Gadus morhua | ENSGMOG00000015452 | 9315 | Macropus eugenii | ENSMEUG00000016429 |
30608 | Microcebus murinus | ENSMICG00000011025 | 9544 | Macaca mulatta | ENSMMUG00000007430 |
9978 | Ochotona princeps | ENSOPRG00000011000 | 9813 | Procavia capensis | ENSPCAG00000013879 |
132908 | Pteropus vampyrus | ENSPVAG00000003321 | 42254 | Sorex araneus | ENSSARG00000012609 |
37347 | Tupaia belangeri | ENSTBEG00000015283 | 99883 | Tetraodon nigroviridis | ENSTNIG00000008460 |
31033 | Takifugu rubripes | ENSTRUG00000016127 | 9478 | Tarsius syrichta | ENSTSYG00000003485 |
30538 | Vicugna pacos | ENSVPAG00000010013 |