Basic Information | |||
Gene ID | 100514639 | ||
Gene Name | SOX11 | ||
Full Name | Uncharacterized protein | ||
Organism | Sus scrofa [9823] |
Cross Reference | |||
UniProt | F1S9L1 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | ssc:100514639 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSSCP00000009219 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 48 | 127 | 2.40e-34 | High mobility group box domain |
ENSSSCP00000009219 | Pfam | PF00505 | IPR009071 | 49 | 117 | 2.00e-25 | High mobility group box domain |
ENSSSCP00000009219 | PIRSF | PIRSF038098 | IPR017386 | 1 | 447 | 1.20e-237 | Transcription factor SOX-12/11/4a |
ENSSSCP00000009219 | ProSiteProfiles | PS50118 | IPR009071 | 49 | 117 | 0.00e-00 | High mobility group box domain |
ENSSSCP00000009219 | SMART | SM00398 | IPR009071 | 48 | 118 | 4.30e-30 | High mobility group box domain |
ENSSSCP00000009219 | SUPERFAMILY | SSF47095 | IPR009071 | 39 | 121 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSSCP00000009219 | PF00505 | 3e-26 | HMG_box | HMG (high mobility group) box |
ENSSSCP00000009219 | PF09011 | 1.4e-08 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSSCP00000009219 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSSSCP00000009219 | GO:0005634 | cellular_component | nucleus |
ENSSSCP00000009219 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10224 | Saccoglossus kowalevskii | 100303598 | 28377 | Anolis carolinensis | 100560274 |
8128 | Oreochromis niloticus | 100712304 | 143995 | Megachile rotundata | 100875283 |
9597 | Pan paniscus | 100987303 | 39432 | Saimiri boliviensis | 101034683 |
8083 | Xiphophorus maculatus | 102220181 | 7897 | Latimeria chalumnae | 102352860 |
7668 | Strongylocentrotus purpuratus | 593520 | 9544 | Macaca mulatta | 707983 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000013354 | 9483 | Callithrix jacchus | ENSCJAG00000011595 |
10141 | Cavia porcellus | ENSCPOG00000019507 | 7955 | Danio rerio | ENSDARG00000095743 |
10020 | Dipodomys ordii | ENSDORG00000006502 | 9796 | Equus caballus | ENSECAG00000013507 |
9031 | Gallus gallus | ENSGALG00000016397 | 9595 | Gorilla gorilla | ENSGGOG00000025579 |
9785 | Loxodonta africana | ENSLAFG00000006327 | 9258 | Ornithorhynchus anatinus | ENSOANG00000006361 |
9986 | Oryctolagus cuniculus | ENSOCUG00000027610 | 30611 | Otolemur garnettii | ENSOGAG00000017044 |
8090 | Oryzias latipes | ENSORLG00000014996 | 9813 | Procavia capensis | ENSPCAG00000014259 |
7757 | Petromyzon marinus | ENSPMAG00000010343 | 13735 | Pelodiscus sinensis | ENSPSIG00000000182 |
9598 | Pan troglodytes | ENSPTRG00000011625 | 9305 | Sarcophilus harrisii | ENSSHAG00000012040 |
59729 | Taeniopygia guttata | ENSTGUG00000012987 | 99883 | Tetraodon nigroviridis | ENSTNIG00000017304 |
31033 | Takifugu rubripes | ENSTRUG00000003243 |
Paralogs | |||
100512542 |