Basic Information | |||
Gene ID | 100521398 | ||
Gene Name | SMARCE1 | ||
Full Name | Uncharacterized protein | ||
Organism | Sus scrofa [9823] |
Cross Reference | |||
UniProt | F1RXE6 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSSCP00000018512 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 63 | 137 | 8.30e-21 | High mobility group box domain |
ENSSSCP00000018512 | Pfam | PF00505 | IPR009071 | 66 | 133 | 7.60e-19 | High mobility group box domain |
ENSSSCP00000018512 | ProSiteProfiles | PS50118 | IPR009071 | 66 | 134 | 0.00e-00 | High mobility group box domain |
ENSSSCP00000018512 | SMART | SM00398 | IPR009071 | 65 | 135 | 2.80e-17 | High mobility group box domain |
ENSSSCP00000018512 | SUPERFAMILY | SSF47095 | IPR009071 | 57 | 137 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSSCP00000018512 | PF00505 | 3.7e-19 | HMG_box | HMG (high mobility group) box |
ENSSSCP00000018512 | PF09011 | 1.5e-07 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSSCP00000018512 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSSSCP00000018512 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSSSCP00000018512 | GO:0005634 | cellular_component | nucleus |
ENSSSCP00000018512 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100054136 | 7425 | Nasonia vitripennis | 100122623 |
6087 | Hydra magnipapillata | 100198243 | 10224 | Saccoglossus kowalevskii | 100369794 |
132113 | Bombus impatiens | 100744180 | 10029 | Cricetulus griseus | 100766868 |
7463 | Apis florea | 100865252 | 143995 | Megachile rotundata | 100879979 |
9305 | Sarcophilus harrisii | 100934187 | 30611 | Otolemur garnettii | 100945553 |
9597 | Pan paniscus | 100994253 | 9555 | Papio anubis | 101022898 |
39432 | Saimiri boliviensis | 101033768 | 43179 | Ictidomys tridecemlineatus | 101976139 |
13735 | Pelodiscus sinensis | 102450925 | 9031 | Gallus gallus | 420047 |
9598 | Pan troglodytes | 454655 | 7668 | Strongylocentrotus purpuratus | 588193 |
9606 | Homo sapiens | 6605 | 28377 | Anolis carolinensis | ENSACAG00000016067 |
9615 | Canis familiaris | ENSCAFG00000016025 | 9483 | Callithrix jacchus | ENSCJAG00000006608 |
10141 | Cavia porcellus | ENSCPOG00000000173 | 51511 | Ciona savignyi | ENSCSAVG00000010367 |
9365 | Erinaceus europaeus | ENSEEUG00000004436 | 9371 | Echinops telfairi | ENSETEG00000004593 |
9685 | Felis catus | ENSFCAG00000009646 | 69293 | Gasterosteus aculeatus | ENSGACG00000000469 |
59463 | Myotis lucifugus | ENSMLUG00000004609 | 13616 | Monodelphis domestica | ENSMODG00000013191 |
9669 | Mustela putorius furo | ENSMPUG00000014660 | 61853 | Nomascus leucogenys | ENSNLEG00000001957 |
9813 | Procavia capensis | ENSPCAG00000001251 | 7757 | Petromyzon marinus | ENSPMAG00000001360 |
9601 | Pongo abelii | ENSPPYG00000008456 | 132908 | Pteropus vampyrus | ENSPVAG00000011355 |
10116 | Rattus norvegicus | ENSRNOG00000010676 | 42254 | Sorex araneus | ENSSARG00000000430 |
59729 | Taeniopygia guttata | ENSTGUG00000002357 | 9739 | Tursiops truncatus | ENSTTRG00000013885 |
30538 | Vicugna pacos | ENSVPAG00000000979 | 9103 | Meleagris gallopavo | 100540719 |
400682 | Amphimedon queenslandica | 100640322 | 30195 | Bombus terrestris | 100651274 |
34638 | Metaseiulus occidentalis | 100898842 | 9595 | Gorilla gorilla | 101153113 |
8083 | Xiphophorus maculatus | 102223126 | 7227 | Drosophila melanogaster | 31846 |
7460 | Apis mellifera | 412077 | 10090 | Mus musculus | 57376 |
7070 | Tribolium castaneum | 656507 | 9544 | Macaca mulatta | 701310 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000008123 | 9358 | Choloepus hoffmanni | ENSCHOG00000008727 |
7719 | Ciona intestinalis | ENSCING00000007774 | 9361 | Dasypus novemcinctus | ENSDNOG00000007636 |
10020 | Dipodomys ordii | ENSDORG00000015999 | 8049 | Gadus morhua | ENSGMOG00000012950 |
7897 | Latimeria chalumnae | ENSLACG00000013900 | 9785 | Loxodonta africana | ENSLAFG00000015555 |
30608 | Microcebus murinus | ENSMICG00000009821 | 9258 | Ornithorhynchus anatinus | ENSOANG00000004371 |
9986 | Oryctolagus cuniculus | ENSOCUG00000008981 | 8128 | Oreochromis niloticus | ENSONIG00000009004 |
9978 | Ochotona princeps | ENSOPRG00000000985 | 8090 | Oryzias latipes | ENSORLG00000002654 |
37347 | Tupaia belangeri | ENSTBEG00000000770 | 99883 | Tetraodon nigroviridis | ENSTNIG00000014150 |
31033 | Takifugu rubripes | ENSTRUG00000006702 |