Basic Information | |||
Gene ID | 100538153 | ||
Gene Name | slx4 | ||
Full Name | Uncharacterized protein | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | F1QPU2 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | dre:100538153 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000082010 | Gene3D | G3DSA:3.30.710.10 | IPR011333 | 539 | 656 | 6.60e-18 | BTB/POZ fold |
ENSDARP00000082010 | Pfam | PF00651 | IPR013069 | 549 | 656 | 1.30e-11 | BTB/POZ |
ENSDARP00000082010 | Pfam | PF09494 | IPR018574 | 1629 | 1684 | 4.00e-14 | Structure-specific endonuclease subunit Slx4 |
ENSDARP00000082010 | ProSiteProfiles | PS50097 | IPR000210 | 557 | 631 | 0.00e-00 | BTB/POZ-like |
ENSDARP00000082010 | ProSiteProfiles | PS50157 | IPR007087 | 206 | 236 | 0.00e-00 | Zinc finger, C2H2 |
ENSDARP00000082010 | SMART | SM00225 | IPR000210 | 557 | 661 | 3.30e-10 | BTB/POZ-like |
ENSDARP00000082010 | SUPERFAMILY | SSF54695 | IPR011333 | 537 | 656 | 0.00e-00 | BTB/POZ fold |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000082010 | PF09494 | 1.8e-14 | Slx4 | Slx4 endonuclease |
ENSDARP00000082010 | PF00651 | 6.9e-12 | BTB | BTB/POZ domain |
ENSDARP00000082010 | PF12171 | 0.00013 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
ENSDARP00000082010 | PF12874 | 0.00018 | zf-met | Zinc-finger of C2H2 type |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSDARP00000082010 | GO:0000724 | biological_process | double-strand break repair via homologous recombination |
ENSDARP00000082010 | GO:0000737 | biological_process | DNA catabolic process, endonucleolytic |
ENSDARP00000082010 | GO:0006260 | biological_process | DNA replication |
ENSDARP00000082010 | GO:0006281 | biological_process | DNA repair |
ENSDARP00000082010 | GO:0006289 | biological_process | nucleotide-excision repair |
ENSDARP00000082010 | GO:0010792 | biological_process | DNA double-strand break processing involved in repair via single-strand annealing |
ENSDARP00000082010 | GO:0043085 | biological_process | positive regulation of catalytic activity |
ENSDARP00000082010 | GO:0000784 | cellular_component | nuclear chromosome, telomeric region |
ENSDARP00000082010 | GO:0000790 | cellular_component | nuclear chromatin |
ENSDARP00000082010 | GO:0005634 | cellular_component | nucleus |
ENSDARP00000082010 | GO:0005730 | cellular_component | nucleolus |
ENSDARP00000082010 | GO:0005737 | cellular_component | cytoplasm |
ENSDARP00000082010 | GO:0030054 | cellular_component | cell junction |
ENSDARP00000082010 | GO:0033557 | cellular_component | Slx1-Slx4 complex |
ENSDARP00000082010 | GO:0048476 | cellular_component | Holliday junction resolvase complex |
ENSDARP00000082010 | GO:0070522 | cellular_component | ERCC4-ERCC1 complex |
ENSDARP00000082010 | GO:0005515 | molecular_function | protein binding |
ENSDARP00000082010 | GO:0008047 | molecular_function | enzyme activator activity |
ENSDARP00000082010 | GO:0008821 | molecular_function | crossover junction endodeoxyribonuclease activity |
ENSDARP00000082010 | GO:0017108 | molecular_function | 5'-flap endonuclease activity |
ENSDARP00000082010 | GO:0048257 | molecular_function | 3'-flap endonuclease activity |
Paralogs | |||
ENSDARG00000092927 |