Basic Information | |||
Gene ID | 100756418 | ||
Gene Name | LOC100756418 | ||
Full Name | PREDICTED: LIM homeobox transcription factor 1-beta-like, partial[Cricetulus griseus]. | ||
Organism | Cricetulus griseus [10029] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003515986 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 137 | 204 | 1.90e-24 | Homeodomain-like |
XP_003515986 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 46 | 104 | 2.30e-15 | Zinc finger, LIM-type |
XP_003515986 | Pfam | PF00046 | IPR001356 | 153 | 209 | 7.10e-18 | Homeobox domain |
XP_003515986 | Pfam | PF00412 | IPR001781 | 48 | 105 | 5.40e-16 | Zinc finger, LIM-type |
XP_003515986 | ProSitePatterns | PS00027 | IPR017970 | 185 | 208 | - | Homeobox, conserved site |
XP_003515986 | ProSitePatterns | PS00478 | IPR001781 | 48 | 83 | - | Zinc finger, LIM-type |
XP_003515986 | ProSiteProfiles | PS50023 | IPR001781 | 46 | 108 | 0.00e-00 | Zinc finger, LIM-type |
XP_003515986 | ProSiteProfiles | PS50071 | IPR001356 | 150 | 210 | 0.00e-00 | Homeobox domain |
XP_003515986 | SMART | SM00132 | IPR001781 | 47 | 101 | 2.10e-19 | Zinc finger, LIM-type |
XP_003515986 | SMART | SM00389 | IPR001356 | 152 | 214 | 6.00e-24 | Homeobox domain |
XP_003515986 | SUPERFAMILY | SSF46689 | IPR009057 | 140 | 210 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003515986 | PF00046 | 4.1e-18 | Homeobox | Homeobox domain |
XP_003515986 | PF00412 | 3.6e-16 | LIM | LIM domain |
XP_003515986 | PF05920 | 7.8e-05 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003515986 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003515986 | GO:0007275 | biological_process | multicellular organismal development |
XP_003515986 | GO:0005634 | cellular_component | nucleus |
XP_003515986 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_003515986 | GO:0008270 | molecular_function | zinc ion binding |
XP_003515986 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
6087 | Hydra magnipapillata | 101239718 | 28377 | Anolis carolinensis | ENSACAG00000001879 |
9371 | Echinops telfairi | ENSETEG00000019757 | 10116 | Rattus norvegicus | ENSRNOG00000017019 |
Paralogs | |||
100760113 |