Basic Information | |||
Gene ID | 100771910 | ||
Gene Name | Rara | ||
Full Name | PREDICTED: retinoic acid receptor alpha isoform 1 [Cricetulusgriseus]. | ||
Organism | Cricetulus griseus [10029] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003510531 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 160 | 416 | 9.40e-95 | Nuclear hormone receptor, ligand-binding |
XP_003510531 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 86 | 159 | 1.20e-33 | Zinc finger, NHR/GATA-type |
XP_003510531 | Pfam | PF00104 | IPR000536 | 220 | 394 | 1.10e-30 | Nuclear hormone receptor, ligand-binding, core |
XP_003510531 | Pfam | PF00105 | IPR001628 | 87 | 155 | 1.20e-32 | Zinc finger, nuclear hormone receptor-type |
XP_003510531 | PRINTS | PR00047 | IPR001628 | 104 | 119 | 5.60e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003510531 | PRINTS | PR00047 | IPR001628 | 137 | 145 | 5.60e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003510531 | PRINTS | PR00047 | IPR001628 | 145 | 153 | 5.60e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003510531 | PRINTS | PR00047 | IPR001628 | 88 | 104 | 5.60e-19 | Zinc finger, nuclear hormone receptor-type |
XP_003510531 | PRINTS | PR00398 | IPR001723 | 149 | 159 | 2.50e-34 | Steroid hormone receptor |
XP_003510531 | PRINTS | PR00398 | IPR001723 | 231 | 252 | 2.50e-34 | Steroid hormone receptor |
XP_003510531 | PRINTS | PR00398 | IPR001723 | 252 | 268 | 2.50e-34 | Steroid hormone receptor |
XP_003510531 | PRINTS | PR00398 | IPR001723 | 319 | 334 | 2.50e-34 | Steroid hormone receptor |
XP_003510531 | PRINTS | PR00398 | IPR001723 | 376 | 393 | 2.50e-34 | Steroid hormone receptor |
XP_003510531 | PRINTS | PR01292 | IPR003078 | 154 | 167 | 4.50e-104 | Retinoic acid receptor |
XP_003510531 | PRINTS | PR01292 | IPR003078 | 176 | 200 | 4.50e-104 | Retinoic acid receptor |
XP_003510531 | PRINTS | PR01292 | IPR003078 | 201 | 217 | 4.50e-104 | Retinoic acid receptor |
XP_003510531 | PRINTS | PR01292 | IPR003078 | 223 | 240 | 4.50e-104 | Retinoic acid receptor |
XP_003510531 | PRINTS | PR01292 | IPR003078 | 274 | 298 | 4.50e-104 | Retinoic acid receptor |
XP_003510531 | PRINTS | PR01292 | IPR003078 | 311 | 323 | 4.50e-104 | Retinoic acid receptor |
XP_003510531 | PRINTS | PR01292 | IPR003078 | 341 | 362 | 4.50e-104 | Retinoic acid receptor |
XP_003510531 | PRINTS | PR01292 | IPR003078 | 385 | 400 | 4.50e-104 | Retinoic acid receptor |
XP_003510531 | PRINTS | PR01292 | IPR003078 | 408 | 421 | 4.50e-104 | Retinoic acid receptor |
XP_003510531 | PRINTS | PR01292 | IPR003078 | 60 | 77 | 4.50e-104 | Retinoic acid receptor |
XP_003510531 | ProSitePatterns | PS00031 | IPR001628 | 88 | 114 | - | Zinc finger, nuclear hormone receptor-type |
XP_003510531 | ProSiteProfiles | PS51030 | IPR001628 | 85 | 160 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
XP_003510531 | SMART | SM00399 | IPR001628 | 85 | 156 | 1.40e-42 | Zinc finger, nuclear hormone receptor-type |
XP_003510531 | SMART | SM00430 | IPR000536 | 230 | 388 | 4.00e-37 | Nuclear hormone receptor, ligand-binding, core |
XP_003510531 | SUPERFAMILY | SSF48508 | IPR008946 | 137 | 164 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
XP_003510531 | SUPERFAMILY | SSF48508 | IPR008946 | 196 | 415 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003510531 | PF00105 | 1.2e-32 | zf-C4 | Zinc finger, C4 type (two domains) |
XP_003510531 | PF00104 | 7.4e-31 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003510531 | GO:0048384 | biological_process | retinoic acid receptor signaling pathway |
XP_003510531 | GO:0005634 | cellular_component | nucleus |
XP_003510531 | GO:0003677 | molecular_function | DNA binding |
XP_003510531 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_003510531 | GO:0003707 | molecular_function | steroid hormone receptor activity |
XP_003510531 | GO:0003708 | molecular_function | retinoic acid receptor activity |
XP_003510531 | GO:0008270 | molecular_function | zinc ion binding |
XP_003510531 | GO:0043565 | molecular_function | sequence-specific DNA binding |