Basic Information
Gene ID 100911406 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Hoxa1; LOC100911406; rCG_52352
Full Name Homeo box A1
Organism Rattus norvegicus [10116]

Cross Reference
UniProt G3V6R3 UniGene Rn.9780
PDB NULL OMIM NULL
KEGG rno:100911406 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000007807 Gene3D G3DSA:1.10.10.60 IPR009057 229 288 3.10e-27 Homeodomain-like
ENSRNOP00000007807 Pfam PF00046 IPR001356 232 285 4.30e-22 Homeobox domain
ENSRNOP00000007807 PRINTS PR00024 IPR020479 250 261 4.80e-08 Homeodomain, metazoa
ENSRNOP00000007807 PRINTS PR00024 IPR020479 265 275 4.80e-08 Homeodomain, metazoa
ENSRNOP00000007807 PRINTS PR00024 IPR020479 275 284 4.80e-08 Homeodomain, metazoa
ENSRNOP00000007807 ProSitePatterns PS00027 IPR017970 261 284 - Homeobox, conserved site
ENSRNOP00000007807 ProSiteProfiles PS50071 IPR001356 226 286 0.00e-00 Homeobox domain
ENSRNOP00000007807 SMART SM00389 IPR001356 228 290 6.20e-28 Homeobox domain
ENSRNOP00000007807 SUPERFAMILY SSF46689 IPR009057 221 288 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000007807 PF00046 2.7e-22 Homeobox Homeobox domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000007807 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000007807 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSRNOP00000007807 GO:0007275 biological_process multicellular organismal development
ENSRNOP00000007807 GO:0005634 cellular_component nucleus
ENSRNOP00000007807 GO:0003677 molecular_function DNA binding
ENSRNOP00000007807 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSRNOP00000007807 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100120176 9555 Papio anubis 100137568
9483 Callithrix jacchus 100399459 10029 Cricetulus griseus 100759424
7463 Apis florea 100865518 143995 Megachile rotundata 100877608
34638 Metaseiulus occidentalis 100898565 10224 Saccoglossus kowalevskii 100303504
8128 Oreochromis niloticus 100694514 9305 Sarcophilus harrisii 100921884
30611 Otolemur garnettii 100946081 9597 Pan paniscus 100980226
31033 Takifugu rubripes 101067786 9595 Gorilla gorilla 101146180
9669 Mustela putorius furo 101670468 9606 Homo sapiens 3231
69293 Gasterosteus aculeatus ENSGACG00000007085 9031 Gallus gallus ENSGALG00000028095
9601 Pongo abelii ENSPPYG00000029903 59729 Taeniopygia guttata ENSTGUG00000002898
99883 Tetraodon nigroviridis ENSTNIG00000000977 39432 Saimiri boliviensis 101048884
9685 Felis catus 101100117 43179 Ictidomys tridecemlineatus 101955545
7897 Latimeria chalumnae 102358948 59463 Myotis lucifugus 102419689
13735 Pelodiscus sinensis 102458587 9598 Pan troglodytes 463308
9913 Bos taurus 537889 7668 Strongylocentrotus purpuratus 576580
7955 Danio rerio 58051 7070 Tribolium castaneum 652930
9544 Macaca mulatta 700723 7460 Apis mellifera 724422
9646 Ailuropoda melanoleuca ENSAMEG00000001828 7719 Ciona intestinalis ENSCING00000001273
10141 Cavia porcellus ENSCPOG00000013500 9361 Dasypus novemcinctus ENSDNOG00000019807
10020 Dipodomys ordii ENSDORG00000006311 9796 Equus caballus ENSECAG00000022454
9365 Erinaceus europaeus ENSEEUG00000001144 8049 Gadus morhua ENSGMOG00000013820
9315 Macropus eugenii ENSMEUG00000012576 30608 Microcebus murinus ENSMICG00000000471
61853 Nomascus leucogenys ENSNLEG00000014975 9258 Ornithorhynchus anatinus ENSOANG00000009163
9978 Ochotona princeps ENSOPRG00000010385 8090 Oryzias latipes ENSORLG00000004981
9813 Procavia capensis ENSPCAG00000015869 132908 Pteropus vampyrus ENSPVAG00000002476
37347 Tupaia belangeri ENSTBEG00000010467 9739 Tursiops truncatus ENSTTRG00000006761
8083 Xiphophorus maculatus ENSXMAG00000001039 7227 Drosophila melanogaster FBgn0002522