Basic Information | |||
Gene ID | 101028709 | ||
Gene Name | SOX8 | ||
Full Name | PREDICTED: transcription factor SOX-8 [Saimiri boliviensisboliviensis]. | ||
Organism | Saimiri boliviensis [39432] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003928594 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 92 | 172 | 1.30e-34 | High mobility group box domain |
XP_003928594 | Pfam | PF00505 | IPR009071 | 94 | 162 | 1.40e-25 | High mobility group box domain |
XP_003928594 | Pfam | PF12444 | IPR022151 | 42 | 81 | 3.60e-19 | Sox developmental protein N-terminal |
XP_003928594 | ProSiteProfiles | PS50118 | IPR009071 | 94 | 162 | 0.00e-00 | High mobility group box domain |
XP_003928594 | SMART | SM00398 | IPR009071 | 93 | 163 | 1.30e-30 | High mobility group box domain |
XP_003928594 | SUPERFAMILY | SSF47095 | IPR009071 | 77 | 166 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003928594 | PF00505 | 9.1e-26 | HMG_box | HMG (high mobility group) box |
XP_003928594 | PF12444 | 8.9e-20 | Sox_N | Sox developmental protein N terminal |
XP_003928594 | PF09011 | 2.7e-11 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003928594 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003928594 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_003928594 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
XP_003928594 | GO:0051216 | biological_process | cartilage development |
XP_003928594 | GO:0005634 | cellular_component | nucleus |
XP_003928594 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100121326 | 30195 | Bombus terrestris | 100649351 |
132113 | Bombus impatiens | 100746111 | 9555 | Papio anubis | 101005143 |
6087 | Hydra magnipapillata | 100201982 | 9483 | Callithrix jacchus | 100406753 |
7029 | Acyrthosiphon pisum | 100572600 | 61853 | Nomascus leucogenys | 100594481 |
400682 | Amphimedon queenslandica | 100631786 | 7463 | Apis florea | 100865918 |
143995 | Megachile rotundata | 100874890 | 34638 | Metaseiulus occidentalis | 100903070 |
9595 | Gorilla gorilla | 101138924 | 51511 | Ciona savignyi | ENSCSAVG00000008424 |
9544 | Macaca mulatta | ENSMMUG00000029283 | 9669 | Mustela putorius furo | ENSMPUG00000015893 |
9739 | Tursiops truncatus | ENSTTRG00000005897 | 7460 | Apis mellifera | 727284 |
7719 | Ciona intestinalis | ENSCING00000001019 | 9258 | Ornithorhynchus anatinus | ENSOANG00000003894 |
Paralogs | |||
101051303 |