Basic Information | |||
Gene ID | 101054202 | ||
Gene Name | PRDM2 | ||
Full Name | PREDICTED: PR domain zinc finger protein 2 [Saimiri boliviensisboliviensis]. | ||
Organism | Saimiri boliviensis [39432] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003935035 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 938 | 973 | 3.60e-07 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003935035 | Pfam | PF00096 | IPR007087 | 195 | 217 | 3.20e-03 | Zinc finger, C2H2 |
XP_003935035 | PIRSF | PIRSF002395 | IPR009170 | 1 | 1487 | 0.00e-00 | Predicted retinoblastoma binding protein (RIZ) |
XP_003935035 | ProSitePatterns | PS00028 | IPR007087 | 167 | 187 | - | Zinc finger, C2H2 |
XP_003935035 | ProSitePatterns | PS00028 | IPR007087 | 197 | 217 | - | Zinc finger, C2H2 |
XP_003935035 | ProSitePatterns | PS00028 | IPR007087 | 290 | 311 | - | Zinc finger, C2H2 |
XP_003935035 | ProSitePatterns | PS00028 | IPR007087 | 942 | 962 | - | Zinc finger, C2H2 |
XP_003935035 | ProSitePatterns | PS00028 | IPR007087 | 970 | 991 | - | Zinc finger, C2H2 |
XP_003935035 | ProSitePatterns | PS00028 | IPR007087 | 999 | 1020 | - | Zinc finger, C2H2 |
XP_003935035 | ProSiteProfiles | PS50157 | IPR007087 | 1261 | 1288 | 0.00e-00 | Zinc finger, C2H2 |
XP_003935035 | ProSiteProfiles | PS50157 | IPR007087 | 165 | 187 | 0.00e-00 | Zinc finger, C2H2 |
XP_003935035 | ProSiteProfiles | PS50157 | IPR007087 | 195 | 217 | 0.00e-00 | Zinc finger, C2H2 |
XP_003935035 | ProSiteProfiles | PS50157 | IPR007087 | 288 | 311 | 0.00e-00 | Zinc finger, C2H2 |
XP_003935035 | ProSiteProfiles | PS50157 | IPR007087 | 940 | 967 | 0.00e-00 | Zinc finger, C2H2 |
XP_003935035 | ProSiteProfiles | PS50157 | IPR007087 | 968 | 991 | 0.00e-00 | Zinc finger, C2H2 |
XP_003935035 | ProSiteProfiles | PS50157 | IPR007087 | 997 | 1020 | 0.00e-00 | Zinc finger, C2H2 |
XP_003935035 | SMART | SM00355 | IPR015880 | 1139 | 1159 | 2.70e-01 | Zinc finger, C2H2-like |
XP_003935035 | SMART | SM00355 | IPR015880 | 1261 | 1281 | 6.00e-02 | Zinc finger, C2H2-like |
XP_003935035 | SMART | SM00355 | IPR015880 | 165 | 187 | 9.50e-06 | Zinc finger, C2H2-like |
XP_003935035 | SMART | SM00355 | IPR015880 | 195 | 217 | 6.30e-06 | Zinc finger, C2H2-like |
XP_003935035 | SMART | SM00355 | IPR015880 | 288 | 311 | 1.40e-05 | Zinc finger, C2H2-like |
XP_003935035 | SMART | SM00355 | IPR015880 | 940 | 962 | 5.30e-04 | Zinc finger, C2H2-like |
XP_003935035 | SMART | SM00355 | IPR015880 | 968 | 991 | 9.00e-04 | Zinc finger, C2H2-like |
XP_003935035 | SMART | SM00355 | IPR015880 | 997 | 1020 | 1.60e-04 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003935035 | PF13894 | 3.3e-19 | zf-C2H2_4 | C2H2-type zinc finger |
XP_003935035 | PF00096 | 8.1e-18 | zf-C2H2 | Zinc finger, C2H2 type |
XP_003935035 | PF12171 | 2.9e-07 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
XP_003935035 | PF13465 | 0.00068 | zf-H2C2_2 | Zinc-finger double domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003935035 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003935035 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_003935035 | GO:0005634 | cellular_component | nucleus |
XP_003935035 | GO:0005794 | cellular_component | Golgi apparatus |
XP_003935035 | GO:0003677 | molecular_function | DNA binding |
XP_003935035 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_003935035 | GO:0008270 | molecular_function | zinc ion binding |
XP_003935035 | GO:0018024 | molecular_function | histone-lysine N-methyltransferase activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9555 | Papio anubis | 101004243 | 10224 | Saccoglossus kowalevskii | 100378993 |
9601 | Pongo abelii | 100436958 | 7668 | Strongylocentrotus purpuratus | 100893443 |
9597 | Pan paniscus | 100971376 | 9669 | Mustela putorius furo | 101684472 |
7897 | Latimeria chalumnae | 102359250 | 9031 | Gallus gallus | 419478 |
28377 | Anolis carolinensis | ENSACAG00000010749 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000006714 |
9913 | Bos taurus | ENSBTAG00000020552 | 9615 | Canis familiaris | ENSCAFG00000016361 |
9358 | Choloepus hoffmanni | ENSCHOG00000003382 | 9483 | Callithrix jacchus | ENSCJAG00000013782 |
10141 | Cavia porcellus | ENSCPOG00000014509 | 7955 | Danio rerio | ENSDARG00000076451 |
9361 | Dasypus novemcinctus | ENSDNOG00000012965 | 10020 | Dipodomys ordii | ENSDORG00000012558 |
9796 | Equus caballus | ENSECAG00000008911 | 9365 | Erinaceus europaeus | ENSEEUG00000014607 |
9371 | Echinops telfairi | ENSETEG00000005321 | 69293 | Gasterosteus aculeatus | ENSGACG00000001208 |
9595 | Gorilla gorilla | ENSGGOG00000005678 | 8049 | Gadus morhua | ENSGMOG00000001670 |
9785 | Loxodonta africana | ENSLAFG00000012229 | 9315 | Macropus eugenii | ENSMEUG00000006160 |
9103 | Meleagris gallopavo | ENSMGAG00000005888 | 30608 | Microcebus murinus | ENSMICG00000017803 |
59463 | Myotis lucifugus | ENSMLUG00000006969 | 13616 | Monodelphis domestica | ENSMODG00000012362 |
9258 | Ornithorhynchus anatinus | ENSOANG00000009908 | 9986 | Oryctolagus cuniculus | ENSOCUG00000009605 |
30611 | Otolemur garnettii | ENSOGAG00000008099 | 8128 | Oreochromis niloticus | ENSONIG00000002165 |
9978 | Ochotona princeps | ENSOPRG00000006894 | 8090 | Oryzias latipes | ENSORLG00000004620 |
9813 | Procavia capensis | ENSPCAG00000012339 | 13735 | Pelodiscus sinensis | ENSPSIG00000005394 |
9598 | Pan troglodytes | ENSPTRG00000000185 | 132908 | Pteropus vampyrus | ENSPVAG00000009935 |
42254 | Sorex araneus | ENSSARG00000007142 | 9305 | Sarcophilus harrisii | ENSSHAG00000014550 |
9823 | Sus scrofa | ENSSSCG00000006223 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000019848 |
37347 | Tupaia belangeri | ENSTBEG00000001407 | 99883 | Tetraodon nigroviridis | ENSTNIG00000014780 |
31033 | Takifugu rubripes | ENSTRUG00000014458 | 9478 | Tarsius syrichta | ENSTSYG00000003618 |
8083 | Xiphophorus maculatus | ENSXMAG00000017053 | 9739 | Tursiops truncatus | ENSTTRG00000005029 |