Basic Information | |||
Gene ID | 101065251 | ||
Gene Name | Sox10a; LOC101065251 | ||
Full Name | Transcription factor Sox10a | ||
Organism | Takifugu rubripes [31033] |
Cross Reference | |||
UniProt | Q6WNS7 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | tru:101065251 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 31033.ENSTRUP00000000110 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSTRUP00000000110 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 107 | 184 | 3.00e-33 | High mobility group box domain |
ENSTRUP00000000110 | Pfam | PF00505 | IPR009071 | 109 | 177 | 2.70e-24 | High mobility group box domain |
ENSTRUP00000000110 | Pfam | PF12444 | IPR022151 | 12 | 99 | 4.20e-26 | Sox developmental protein N-terminal |
ENSTRUP00000000110 | ProSiteProfiles | PS50118 | IPR009071 | 109 | 177 | 0.00e-00 | High mobility group box domain |
ENSTRUP00000000110 | SMART | SM00398 | IPR009071 | 108 | 178 | 6.20e-30 | High mobility group box domain |
ENSTRUP00000000110 | SUPERFAMILY | SSF47095 | IPR009071 | 91 | 181 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSTRUP00000000110 | PF12444 | 4.2e-26 | Sox_N | Sox developmental protein N terminal |
ENSTRUP00000000110 | PF00505 | 1.7e-24 | HMG_box | HMG (high mobility group) box |
ENSTRUP00000000110 | PF09011 | 1.5e-10 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSTRUP00000000110 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSTRUP00000000110 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSTRUP00000000110 | GO:0005634 | cellular_component | nucleus |
ENSTRUP00000000110 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8083 | Xiphophorus maculatus | 102221365 | 69293 | Gasterosteus aculeatus | ENSGACG00000016017 |
8049 | Gadus morhua | ENSGMOG00000005629 | 8128 | Oreochromis niloticus | ENSONIG00000018032 |
99883 | Tetraodon nigroviridis | ENSTNIG00000004532 |
Paralogs | |||
ENSTRUG00000009750 |