Basic Information | |||
Gene ID | 101174425 | ||
Gene Name | hoxC5a; LOC101174425 | ||
Full Name | HoxC5a | ||
Organism | Oryzias latipes [8090] |
Cross Reference | |||
UniProt | Q3V607 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | ola:101174425 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 8090.ENSORLP00000009961 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSORLP00000009961 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 158 | 223 | 2.50e-28 | Homeodomain-like |
ENSORLP00000009961 | Pfam | PF00046 | IPR001356 | 164 | 220 | 5.00e-22 | Homeobox domain |
ENSORLP00000009961 | PRINTS | PR00024 | IPR020479 | 185 | 196 | 8.40e-09 | Homeodomain, metazoa |
ENSORLP00000009961 | PRINTS | PR00024 | IPR020479 | 200 | 210 | 8.40e-09 | Homeodomain, metazoa |
ENSORLP00000009961 | PRINTS | PR00024 | IPR020479 | 210 | 219 | 8.40e-09 | Homeodomain, metazoa |
ENSORLP00000009961 | PRINTS | PR00025 | IPR017995 | 147 | 154 | 5.30e-06 | Homeobox protein, antennapedia type |
ENSORLP00000009961 | PRINTS | PR00025 | IPR017995 | 164 | 179 | 5.30e-06 | Homeobox protein, antennapedia type |
ENSORLP00000009961 | ProSitePatterns | PS00027 | IPR017970 | 196 | 219 | - | Homeobox, conserved site |
ENSORLP00000009961 | ProSitePatterns | PS00032 | IPR001827 | 148 | 153 | - | Homeobox protein, antennapedia type, conserved site |
ENSORLP00000009961 | ProSiteProfiles | PS50071 | IPR001356 | 161 | 221 | 0.00e-00 | Homeobox domain |
ENSORLP00000009961 | SMART | SM00389 | IPR001356 | 163 | 225 | 1.20e-28 | Homeobox domain |
ENSORLP00000009961 | SUPERFAMILY | SSF46689 | IPR009057 | 149 | 221 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSORLP00000009961 | PF00046 | 2.4e-22 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSORLP00000009961 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSORLP00000009961 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSORLP00000009961 | GO:0007275 | biological_process | multicellular organismal development |
ENSORLP00000009961 | GO:0005634 | cellular_component | nucleus |
ENSORLP00000009961 | GO:0003677 | molecular_function | DNA binding |
ENSORLP00000009961 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSORLP00000009961 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9305 | Sarcophilus harrisii | 100918823 | 9597 | Pan paniscus | 100978672 |
9595 | Gorilla gorilla | 101129243 | 8364 | Xenopus tropicalis | 100487879 |
61853 | Nomascus leucogenys | 100586177 | 10029 | Cricetulus griseus | 100763415 |
30611 | Otolemur garnettii | 100945778 | 9685 | Felis catus | 101090952 |
9669 | Mustela putorius furo | 101670218 | 9615 | Canis familiaris | 102152615 |
59463 | Myotis lucifugus | 102431282 | 9361 | Dasypus novemcinctus | ENSDNOG00000009604 |
10020 | Dipodomys ordii | ENSDORG00000006999 | 69293 | Gasterosteus aculeatus | ENSGACG00000009416 |
9785 | Loxodonta africana | ENSLAFG00000002367 | 30608 | Microcebus murinus | ENSMICG00000011726 |
9978 | Ochotona princeps | ENSOPRG00000006095 | 132908 | Pteropus vampyrus | ENSPVAG00000014723 |
43179 | Ictidomys tridecemlineatus | 101963611 | 28377 | Anolis carolinensis | ENSACAG00000010927 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000000691 | 8049 | Gadus morhua | ENSGMOG00000017901 |
9315 | Macropus eugenii | ENSMEUG00000003425 | 8128 | Oreochromis niloticus | ENSONIG00000012241 |
9813 | Procavia capensis | ENSPCAG00000011018 | 99883 | Tetraodon nigroviridis | ENSTNIG00000001760 |
31033 | Takifugu rubripes | ENSTRUG00000003635 | 9739 | Tursiops truncatus | ENSTTRG00000004532 |