Basic Information | |||
Gene ID | 102354709 | ||
Gene Name | HMG20B | ||
Full Name | Uncharacterized protein | ||
Organism | Latimeria chalumnae [7897] |
Cross Reference | |||
UniProt | H3AR83 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSLACP00000012154 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 52 | 132 | 5.50e-24 | High mobility group box domain |
ENSLACP00000012154 | Pfam | PF00505 | IPR009071 | 62 | 128 | 1.70e-19 | High mobility group box domain |
ENSLACP00000012154 | ProSiteProfiles | PS50118 | IPR009071 | 61 | 129 | 0.00e-00 | High mobility group box domain |
ENSLACP00000012154 | SMART | SM00355 | IPR015880 | 177 | 201 | 4.00e-02 | Zinc finger, C2H2-like |
ENSLACP00000012154 | SMART | SM00398 | IPR009071 | 60 | 130 | 2.50e-24 | High mobility group box domain |
ENSLACP00000012154 | SUPERFAMILY | SSF47095 | IPR009071 | 46 | 129 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSLACP00000012154 | PF00505 | 1.7e-19 | HMG_box | HMG (high mobility group) box |
ENSLACP00000012154 | PF09011 | 2.1e-12 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSLACP00000012154 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSLACP00000012154 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSLACP00000012154 | GO:0005634 | cellular_component | nucleus |
ENSLACP00000012154 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9646 | Ailuropoda melanoleuca | ENSAMEG00000010946 | 10141 | Cavia porcellus | ENSCPOG00000020879 |
9669 | Mustela putorius furo | ENSMPUG00000007386 | 7668 | Strongylocentrotus purpuratus | 577135 |
7070 | Tribolium castaneum | 659902 |