Basic Information | |||
Gene ID | 16876 ; ![]() ![]() | ||
Gene Name | Lhx9 | ||
Full Name | LIM/homeobox protein Lhx9 | ||
Organism | Mus musculus [10090] |
Cross Reference | |||
UniProt | Q9WUH2 | UniGene | Mm.250732 |
PDB | NULL | OMIM | NULL |
KEGG | mmu:16876 | UCSC | uc007cvu.2 |
Protein Interactions | |
DIP | NULL |
IntAct | Q9WUH2 |
MINT | MINT-1340747 |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSMUSP00000107657 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 258 | 324 | 1.20e-22 | Homeodomain-like |
ENSMUSP00000107657 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 131 | 190 | 9.30e-17 | Zinc finger, LIM-type |
ENSMUSP00000107657 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 70 | 129 | 2.40e-15 | Zinc finger, LIM-type |
ENSMUSP00000107657 | Pfam | PF00046 | IPR001356 | 268 | 324 | 7.80e-19 | Homeobox domain |
ENSMUSP00000107657 | Pfam | PF00412 | IPR001781 | 133 | 188 | 4.20e-17 | Zinc finger, LIM-type |
ENSMUSP00000107657 | Pfam | PF00412 | IPR001781 | 71 | 128 | 2.10e-15 | Zinc finger, LIM-type |
ENSMUSP00000107657 | ProSitePatterns | PS00027 | IPR017970 | 300 | 323 | - | Homeobox, conserved site |
ENSMUSP00000107657 | ProSitePatterns | PS00478 | IPR001781 | 133 | 168 | - | Zinc finger, LIM-type |
ENSMUSP00000107657 | ProSitePatterns | PS00478 | IPR001781 | 71 | 105 | - | Zinc finger, LIM-type |
ENSMUSP00000107657 | ProSiteProfiles | PS50023 | IPR001781 | 131 | 193 | 0.00e-00 | Zinc finger, LIM-type |
ENSMUSP00000107657 | ProSiteProfiles | PS50023 | IPR001781 | 69 | 130 | 0.00e-00 | Zinc finger, LIM-type |
ENSMUSP00000107657 | ProSiteProfiles | PS50071 | IPR001356 | 265 | 325 | 0.00e-00 | Homeobox domain |
ENSMUSP00000107657 | SMART | SM00132 | IPR001781 | 132 | 186 | 3.00e-21 | Zinc finger, LIM-type |
ENSMUSP00000107657 | SMART | SM00132 | IPR001781 | 70 | 123 | 1.70e-19 | Zinc finger, LIM-type |
ENSMUSP00000107657 | SMART | SM00389 | IPR001356 | 267 | 329 | 3.30e-24 | Homeobox domain |
ENSMUSP00000107657 | SUPERFAMILY | SSF46689 | IPR009057 | 254 | 324 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSMUSP00000107657 | PF00412 | 5.9e-33 | LIM | LIM domain |
ENSMUSP00000107657 | PF00046 | 3.7e-19 | Homeobox | Homeobox domain |
ENSMUSP00000107657 | PF05920 | 0.00052 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSMUSP00000107657 | GO:0008045 | biological_process | motor neuron axon guidance |
ENSMUSP00000107657 | GO:0045892 | biological_process | negative regulation of transcription, DNA-templated |
ENSMUSP00000107657 | GO:0005634 | cellular_component | nucleus |
ENSMUSP00000107657 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSMUSP00000107657 | GO:0003714 | molecular_function | transcription corepressor activity |
ENSMUSP00000107657 | GO:0008270 | molecular_function | zinc ion binding |
ENSMUSP00000107657 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10224 | Saccoglossus kowalevskii | 100303477 | 9986 | Oryctolagus cuniculus | 100344590 |
9483 | Callithrix jacchus | 100387216 | 10029 | Cricetulus griseus | 100763500 |
7463 | Apis florea | 100872145 | 143995 | Megachile rotundata | 100875146 |
30611 | Otolemur garnettii | 100945686 | 9597 | Pan paniscus | 100992338 |
9555 | Papio anubis | 101006478 | 9669 | Mustela putorius furo | 101677768 |
8083 | Xiphophorus maculatus | 102235898 | 7897 | Latimeria chalumnae | 102364557 |
13735 | Pelodiscus sinensis | 102448488 | 132113 | Bombus impatiens | 100747359 |
39432 | Saimiri boliviensis | 101030620 | 43179 | Ictidomys tridecemlineatus | 101958115 |
9913 | Bos taurus | 515012 | 7955 | Danio rerio | 550405 |
9365 | Erinaceus europaeus | ENSEEUG00000007785 | 69293 | Gasterosteus aculeatus | ENSGACG00000007885 |
9595 | Gorilla gorilla | ENSGGOG00000006853 | 9544 | Macaca mulatta | ENSMMUG00000012259 |
9978 | Ochotona princeps | ENSOPRG00000012003 | 59729 | Taeniopygia guttata | ENSTGUG00000004361 |
99883 | Tetraodon nigroviridis | ENSTNIG00000010177 | 31033 | Takifugu rubripes | ENSTRUG00000001015 |
30538 | Vicugna pacos | ENSVPAG00000003940 | 9823 | Sus scrofa | 397597 |
9615 | Canis familiaris | 490257 | 9606 | Homo sapiens | 56956 |
7668 | Strongylocentrotus purpuratus | 576656 | 7070 | Tribolium castaneum | 658719 |
28377 | Anolis carolinensis | ENSACAG00000014568 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000017592 |
9358 | Choloepus hoffmanni | ENSCHOG00000000991 | 9361 | Dasypus novemcinctus | ENSDNOG00000000979 |
10020 | Dipodomys ordii | ENSDORG00000002192 | 9371 | Echinops telfairi | ENSETEG00000019576 |
9685 | Felis catus | ENSFCAG00000001815 | 9031 | Gallus gallus | ENSGALG00000002223 |
8049 | Gadus morhua | ENSGMOG00000018579 | 9785 | Loxodonta africana | ENSLAFG00000007278 |
9315 | Macropus eugenii | ENSMEUG00000011263 | 9103 | Meleagris gallopavo | ENSMGAG00000005807 |
61853 | Nomascus leucogenys | ENSNLEG00000018062 | 9258 | Ornithorhynchus anatinus | ENSOANG00000002003 |
8090 | Oryzias latipes | ENSORLG00000008756 | 9813 | Procavia capensis | ENSPCAG00000013052 |
9598 | Pan troglodytes | ENSPTRG00000001814 | 132908 | Pteropus vampyrus | ENSPVAG00000017007 |
42254 | Sorex araneus | ENSSARG00000014321 | 9305 | Sarcophilus harrisii | ENSSHAG00000012386 |
37347 | Tupaia belangeri | ENSTBEG00000005026 | 9478 | Tarsius syrichta | ENSTSYG00000001931 |